We, Russian scientists of the autosome team, are depressed by the dire events caused by Russian military actions in Ukraine.
We express our condolences to all affected people and sincerely hope for a prompt transition to peace.
Model info
Transcription factorRAX2
(GeneCards)
ModelRAX2_HUMAN.H11MO.0.D
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceHT-SELEX
Model releaseHOCOMOCOv10
Model length12
Quality
D
Motif rank
0
ConsensushTAATTRRhYhW
Best auROC (human)
Best auROC (mouse)
Peak sets in benchmark (human)
Peak sets in benchmark (mouse)
Aligned words33721
TF familyPaired-related HD factors {3.1.3}
TF subfamilyRAX {3.1.3.22}
HGNCHGNC:18286
EntrezGeneGeneID:84839
(SSTAR profile)
UniProt IDRAX2_HUMAN
UniProt ACQ96IS3
(TFClass)
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 5.595644999999999
0.0005 6.531195
0.0001 8.35193
GTEx tissue expression atlas RAX2 expression
ReMap ChIP-seq dataset list RAX2 datasets
Motifs in JASPAR
PCM
ACGT
015566.012648.05216.010146.0
021821.752046.751488.7528218.75
0328954.251460.251642.251519.25
0433284.7593.7596.75100.75
052.011.020.033543.0
0615.02073.0314.031174.0
0722926.25890.259757.252.25
0817468.253012.2512761.25334.25
0918831.254010.253413.257321.25
101858.02765.02175.026778.0
119111.04288.03348.016829.0
1223537.03067.03124.03848.0
PWM
ACGT
01-0.4110.41-0.4760.19
02-1.527-1.41-1.7281.212
031.238-1.747-1.63-1.708
041.377-4.468-4.437-4.397
05-7.508-6.425-5.9171.385
06-6.167-1.398-3.2781.312
071.005-2.2410.15-7.455
080.733-1.0240.419-3.216
090.808-0.738-0.899-0.137
10-1.507-1.11-1.351.16
110.082-0.671-0.9190.695
121.031-1.006-0.988-0.78