Model info
| Transcription factor | REST (GeneCards) | ||||||||
| Model | REST_HUMAN.H11MO.0.A | ||||||||
| Model type | Mononucleotide PWM | ||||||||
| LOGO |  | ||||||||
| LOGO (reverse complement) |  | ||||||||
| Data source | ChIP-Seq | ||||||||
| Model release | HOCOMOCOv11 | ||||||||
| Model length | 22 | ||||||||
| Quality | A | ||||||||
| Motif rank | 0 | ||||||||
| Consensus | dTCAGSACCdhGGACAGMdShh | ||||||||
| Best auROC (human) | 0.991 | ||||||||
| Best auROC (mouse) | 0.98 | ||||||||
| Peak sets in benchmark (human) | 147 | ||||||||
| Peak sets in benchmark (mouse) | 33 | ||||||||
| Aligned words | 500 | ||||||||
| TF family | Factors with multiple dispersed zinc fingers {2.3.4} | ||||||||
| TF subfamily | unclassified {2.3.4.0} | ||||||||
| HGNC | HGNC:9966 | ||||||||
| EntrezGene | GeneID:5978 (SSTAR profile) | ||||||||
| UniProt ID | REST_HUMAN | ||||||||
| UniProt AC | Q13127 (TFClass) | ||||||||
| Comment | |||||||||
| Downloads | pcm
pwm alignment threshold to P-value grid | ||||||||
| Standard thresholds |
| ||||||||
| GTEx tissue expression atlas | REST expression | ||||||||
| ReMap ChIP-seq dataset list | REST datasets | ||||||||
| Motifs in JASPAR |
PCM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 71.0 | 42.0 | 96.0 | 291.0 |
| 02 | 14.0 | 71.0 | 19.0 | 396.0 |
| 03 | 6.0 | 462.0 | 8.0 | 24.0 |
| 04 | 458.0 | 14.0 | 12.0 | 16.0 |
| 05 | 10.0 | 20.0 | 469.0 | 1.0 |
| 06 | 37.0 | 338.0 | 87.0 | 38.0 |
| 07 | 474.0 | 7.0 | 13.0 | 6.0 |
| 08 | 7.0 | 472.0 | 15.0 | 6.0 |
| 09 | 15.0 | 452.0 | 11.0 | 22.0 |
| 10 | 276.0 | 55.0 | 79.0 | 90.0 |
| 11 | 63.0 | 150.0 | 43.0 | 244.0 |
| 12 | 15.0 | 4.0 | 479.0 | 2.0 |
| 13 | 12.0 | 3.0 | 482.0 | 3.0 |
| 14 | 432.0 | 33.0 | 14.0 | 21.0 |
| 15 | 7.0 | 398.0 | 73.0 | 22.0 |
| 16 | 474.0 | 5.0 | 9.0 | 12.0 |
| 17 | 13.0 | 9.0 | 471.0 | 7.0 |
| 18 | 68.0 | 321.0 | 55.0 | 56.0 |
| 19 | 101.0 | 15.0 | 234.0 | 150.0 |
| 20 | 69.0 | 303.0 | 90.0 | 38.0 |
| 21 | 67.0 | 353.0 | 13.0 | 67.0 |
| 22 | 136.0 | 215.0 | 62.0 | 87.0 |
PWM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | -0.556 | -1.067 | -0.26 | 0.838 |
| 02 | -2.096 | -0.556 | -1.818 | 1.145 |
| 03 | -2.819 | 1.298 | -2.584 | -1.6 |
| 04 | 1.29 | -2.096 | -2.234 | -1.975 |
| 05 | -2.394 | -1.77 | 1.313 | -3.903 |
| 06 | -1.189 | 0.987 | -0.357 | -1.163 |
| 07 | 1.324 | -2.694 | -2.163 | -2.819 |
| 08 | -2.694 | 1.32 | -2.034 | -2.819 |
| 09 | -2.034 | 1.276 | -2.311 | -1.681 |
| 10 | 0.785 | -0.805 | -0.452 | -0.324 |
| 11 | -0.673 | 0.18 | -1.044 | 0.663 |
| 12 | -2.034 | -3.126 | 1.334 | -3.573 |
| 13 | -2.234 | -3.325 | 1.34 | -3.325 |
| 14 | 1.231 | -1.298 | -2.096 | -1.725 |
| 15 | -2.694 | 1.15 | -0.529 | -1.681 |
| 16 | 1.324 | -2.961 | -2.484 | -2.234 |
| 17 | -2.163 | -2.484 | 1.317 | -2.694 |
| 18 | -0.599 | 0.936 | -0.805 | -0.788 |
| 19 | -0.21 | -2.034 | 0.621 | 0.18 |
| 20 | -0.584 | 0.878 | -0.324 | -1.163 |
| 21 | -0.613 | 1.03 | -2.163 | -0.613 |
| 22 | 0.083 | 0.537 | -0.689 | -0.357 |