Model info
| Transcription factor | Rest | ||||||||
| Model | REST_MOUSE.H11MO.0.A | ||||||||
| Model type | Mononucleotide PWM | ||||||||
| LOGO |  | ||||||||
| LOGO (reverse complement) |  | ||||||||
| Data source | ChIP-Seq | ||||||||
| Model release | HOCOMOCOv11 | ||||||||
| Model length | 22 | ||||||||
| Quality | A | ||||||||
| Motif rank | 0 | ||||||||
| Consensus | dYCAGSACCdhGGACAGMdSMh | ||||||||
| Best auROC (human) | 0.99 | ||||||||
| Best auROC (mouse) | 0.982 | ||||||||
| Peak sets in benchmark (human) | 147 | ||||||||
| Peak sets in benchmark (mouse) | 33 | ||||||||
| Aligned words | 378 | ||||||||
| TF family | Factors with multiple dispersed zinc fingers {2.3.4} | ||||||||
| TF subfamily | unclassified {2.3.4.0} | ||||||||
| MGI | MGI:104897 | ||||||||
| EntrezGene | GeneID:19712 (SSTAR profile) | ||||||||
| UniProt ID | REST_MOUSE | ||||||||
| UniProt AC | Q8VIG1 (TFClass) | ||||||||
| Comment | |||||||||
| Downloads | pcm
pwm alignment threshold to P-value grid | ||||||||
| Standard thresholds |
| ||||||||
| GTEx tissue expression atlas | Rest expression | ||||||||
| Motifs in JASPAR |
PCM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 55.0 | 39.0 | 104.0 | 180.0 |
| 02 | 11.0 | 74.0 | 33.0 | 260.0 |
| 03 | 20.0 | 315.0 | 10.0 | 33.0 |
| 04 | 331.0 | 7.0 | 36.0 | 4.0 |
| 05 | 7.0 | 26.0 | 337.0 | 8.0 |
| 06 | 21.0 | 233.0 | 74.0 | 50.0 |
| 07 | 372.0 | 1.0 | 4.0 | 1.0 |
| 08 | 0.0 | 375.0 | 1.0 | 2.0 |
| 09 | 1.0 | 356.0 | 5.0 | 16.0 |
| 10 | 219.0 | 36.0 | 57.0 | 66.0 |
| 11 | 58.0 | 109.0 | 16.0 | 195.0 |
| 12 | 2.0 | 0.0 | 376.0 | 0.0 |
| 13 | 1.0 | 0.0 | 377.0 | 0.0 |
| 14 | 357.0 | 15.0 | 2.0 | 4.0 |
| 15 | 1.0 | 334.0 | 37.0 | 6.0 |
| 16 | 374.0 | 1.0 | 2.0 | 1.0 |
| 17 | 5.0 | 0.0 | 373.0 | 0.0 |
| 18 | 46.0 | 277.0 | 26.0 | 29.0 |
| 19 | 79.0 | 7.0 | 178.0 | 114.0 |
| 20 | 61.0 | 232.0 | 64.0 | 21.0 |
| 21 | 40.0 | 294.0 | 12.0 | 32.0 |
| 22 | 111.0 | 166.0 | 36.0 | 65.0 |
PWM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | -0.53 | -0.863 | 0.094 | 0.637 |
| 02 | -2.04 | -0.24 | -1.024 | 1.002 |
| 03 | -1.497 | 1.193 | -2.123 | -1.024 |
| 04 | 1.242 | -2.426 | -0.94 | -2.862 |
| 05 | -2.426 | -1.251 | 1.26 | -2.315 |
| 06 | -1.451 | 0.893 | -0.24 | -0.623 |
| 07 | 1.359 | -3.654 | -2.862 | -3.654 |
| 08 | -4.17 | 1.367 | -3.654 | -3.316 |
| 09 | -3.654 | 1.315 | -2.695 | -1.703 |
| 10 | 0.832 | -0.94 | -0.495 | -0.352 |
| 11 | -0.478 | 0.141 | -1.703 | 0.716 |
| 12 | -3.316 | -4.17 | 1.369 | -4.17 |
| 13 | -3.654 | -4.17 | 1.372 | -4.17 |
| 14 | 1.318 | -1.762 | -3.316 | -2.862 |
| 15 | -3.654 | 1.251 | -0.914 | -2.551 |
| 16 | 1.364 | -3.654 | -3.316 | -3.654 |
| 17 | -2.695 | -4.17 | 1.361 | -4.17 |
| 18 | -0.704 | 1.065 | -1.251 | -1.147 |
| 19 | -0.176 | -2.426 | 0.626 | 0.185 |
| 20 | -0.429 | 0.889 | -0.382 | -1.451 |
| 21 | -0.839 | 1.124 | -1.963 | -1.053 |
| 22 | 0.159 | 0.557 | -0.94 | -0.367 |