We, Russian scientists of the autosome team, are depressed by the dire events caused by Russian military actions in Ukraine.
We express our condolences to all affected people and sincerely hope for a prompt transition to peace.
Model info
Transcription factorRFX3
(GeneCards)
ModelRFX3_HUMAN.H11MO.0.B
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceIntegrative
Model releaseHOCOMOCOv9
Model length14
Quality
B
Motif rank
0
ConsensusbGTTRCCATGGhRn
Best auROC (human)
Best auROC (mouse)
Peak sets in benchmark (human)
Peak sets in benchmark (mouse)
Aligned words772
TF familyRFX-related factors {3.3.3}
TF subfamilyRFX3 {3.3.3.0.3}
HGNCHGNC:9984
EntrezGeneGeneID:5991
(SSTAR profile)
UniProt IDRFX3_HUMAN
UniProt ACP48380
(TFClass)
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 1.10071
0.0005 2.60626
0.0001 5.70946
GTEx tissue expression atlas RFX3 expression
ReMap ChIP-seq dataset list RFX3 datasets
Motifs in JASPAR
PCM
ACGT
0173.555198.684229.985152.439
020.00.0654.6630.0
030.00.00.0654.663
0445.8195.850.0602.993
05218.0972.925399.7233.921
060.0583.8540.070.809
070.0517.1490.0137.514
08653.7740.00.4440.444
094.4420.036.092614.128
1068.9650.0585.6980.0
1144.1940.888609.580.0
1278.842182.78547.793345.242
13384.2330.444196.89173.094
14363.64496.17996.17998.66
PWM
ACGT
01-0.7880.1920.337-0.07
02-4.625-4.6251.379-4.625
03-4.625-4.625-4.6251.379
04-1.248-3.097-4.6251.297
050.285-3.5930.887-1.537
06-4.6251.265-4.625-0.825
07-4.6251.144-4.625-0.172
081.378-4.625-4.382-4.382
09-3.305-4.625-1.4781.315
10-0.851-4.6251.268-4.625
11-1.283-4.1881.308-4.625
12-0.720.109-1.2070.741
130.848-4.3820.183-0.794
140.793-0.525-0.525-0.5