We, Russian scientists of the autosome team, are depressed by the dire events caused by Russian military actions in Ukraine.
We express our condolences to all affected people and sincerely hope for a prompt transition to peace.
Model info
Transcription factorRfx3
ModelRFX3_MOUSE.H11DI.0.C
Model typeDinucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceChIP-Seq
Model releaseHOCOMOCOv11
Model length18
Quality
C
Motif rank
0
ConsensusbSbGTTGCCWWGGnRACv
Best auROC (human)
Best auROC (mouse)0.994
Peak sets in benchmark (human)
Peak sets in benchmark (mouse)2
Aligned words354
TF familyRFX-related factors {3.3.3}
TF subfamilyRFX3 {3.3.3.0.3}
MGIMGI:106582
EntrezGeneGeneID:19726
(SSTAR profile)
UniProt IDRFX3_MOUSE
UniProt ACP48381
(TFClass)
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 0.71016
0.0005 3.39241
0.0001 9.155460000000001
GTEx tissue expression atlas Rfx3 expression
Motifs in JASPAR
MA0798.1 (RFX3; Homo sapiens)
PCM
AAACAGATCACCCGCTGAGCGGGTTATCTGTT
012.030.09.05.05.047.023.025.07.092.026.015.00.035.012.017.0
021.05.07.01.013.047.094.050.03.031.032.04.00.012.039.011.0
030.00.017.00.00.00.095.00.00.00.0171.01.00.00.066.00.0
040.00.00.00.00.00.00.00.00.012.00.0337.00.00.00.01.0
050.00.00.00.01.00.00.011.00.00.00.00.03.022.00.0313.0
060.00.04.00.00.00.021.01.00.00.00.00.020.04.0287.013.0
070.020.00.00.00.04.00.00.00.0276.01.035.00.014.00.00.0
080.00.00.00.00.0259.01.054.00.01.00.00.00.033.00.02.0
090.00.00.00.0224.013.017.039.00.00.01.00.049.01.04.02.0
1038.07.030.0198.00.01.04.09.02.00.05.015.09.00.07.025.0
110.00.049.00.00.00.08.00.00.00.046.00.018.00.0229.00.0
120.00.018.00.00.00.00.00.026.03.0303.00.00.00.00.00.0
130.021.05.00.02.01.00.00.086.0118.056.061.00.00.00.00.0
1435.03.050.00.079.03.055.03.040.02.018.01.017.04.033.07.0
15136.012.022.01.09.01.02.00.0139.016.00.01.07.01.01.02.0
161.0262.03.025.02.015.05.08.02.018.02.03.00.03.00.01.0
171.02.02.00.059.095.0111.033.02.03.04.01.06.04.023.04.0
PWM
AAACAGATCACCCGCTGAGCGGGTTATCTGTT
01-2.2410.311-0.865-1.422-1.4220.7560.0490.131-1.1051.4240.17-0.37-4.1070.464-0.587-0.247
02-2.79-1.422-1.105-2.79-0.5090.7561.4450.817-1.8880.3440.375-1.628-4.107-0.5870.571-0.671
03-4.107-4.107-0.247-4.107-4.107-4.1071.456-4.107-4.107-4.1072.042-2.79-4.107-4.1071.093-4.107
04-4.107-4.107-4.107-4.107-4.107-4.107-4.107-4.107-4.107-0.587-4.1072.719-4.107-4.107-4.107-2.79
05-4.107-4.107-4.107-4.107-2.79-4.107-4.107-0.671-4.107-4.107-4.107-4.107-1.8880.006-4.1072.645
06-4.107-4.107-1.628-4.107-4.107-4.107-0.04-2.79-4.107-4.107-4.107-4.107-0.088-1.6282.559-0.509
07-4.107-0.088-4.107-4.107-4.107-1.628-4.107-4.107-4.1072.52-2.790.464-4.107-0.437-4.107-4.107
08-4.107-4.107-4.107-4.107-4.1072.456-2.790.894-4.107-2.79-4.107-4.107-4.1070.406-4.107-2.241
09-4.107-4.107-4.107-4.1072.311-0.509-0.2470.571-4.107-4.107-2.79-4.1070.797-2.79-1.628-2.241
100.545-1.1050.3112.188-4.107-2.79-1.628-0.865-2.241-4.107-1.422-0.37-0.865-4.107-1.1050.131
11-4.107-4.1070.797-4.107-4.107-4.107-0.978-4.107-4.107-4.1070.735-4.107-0.191-4.1072.333-4.107
12-4.107-4.107-0.191-4.107-4.107-4.107-4.107-4.1070.17-1.8882.613-4.107-4.107-4.107-4.107-4.107
13-4.107-0.04-1.422-4.107-2.241-2.79-4.107-4.1071.3571.6720.931.015-4.107-4.107-4.107-4.107
140.464-1.8880.817-4.1071.272-1.8880.912-1.8880.596-2.241-0.191-2.79-0.247-1.6280.406-1.105
151.813-0.5870.006-2.79-0.865-2.79-2.241-4.1071.835-0.307-4.107-2.79-1.105-2.79-2.79-2.241
16-2.792.468-1.8880.131-2.241-0.37-1.422-0.978-2.241-0.191-2.241-1.888-4.107-1.888-4.107-2.79
17-2.79-2.241-2.241-4.1070.9821.4561.6110.406-2.241-1.888-1.628-2.79-1.251-1.6280.049-1.628