We, Russian scientists of the autosome team, are depressed by the dire events caused by Russian military actions in Ukraine.
We express our condolences to all affected people and sincerely hope for a prompt transition to peace.
Model info
Transcription factorRfx6
ModelRFX6_MOUSE.H11DI.0.C
Model typeDinucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceChIP-Seq
Model releaseHOCOMOCOv11
Model length16
Quality
C
Motif rank
0
ConsensusbbGYWKCYvdGnnvvn
Best auROC (human)
Best auROC (mouse)0.954
Peak sets in benchmark (human)
Peak sets in benchmark (mouse)3
Aligned words522
TF familyRFX-related factors {3.3.3}
TF subfamilyRFX6 (RFXDC-1) {3.3.3.0.6}
MGIMGI:2445208
EntrezGeneGeneID:320995
(SSTAR profile)
UniProt IDRFX6_MOUSE
UniProt ACQ8C7R7
(TFClass)
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 9.52481
0.0005 11.26266
0.0001 14.571760000000001
GTEx tissue expression atlas Rfx6 expression
Motifs in JASPAR
PCM
AAACAGATCACCCGCTGAGCGGGTTATCTGTT
018.06.020.019.023.021.024.097.06.018.050.034.07.05.047.017.0
021.00.041.02.04.01.044.01.04.00.0136.01.03.00.0163.01.0
030.01.04.07.00.00.00.01.023.049.032.0280.00.03.00.02.0
043.02.02.016.010.01.02.040.011.07.01.017.045.042.016.0187.0
0510.01.037.021.06.00.09.037.00.01.010.010.019.01.0190.050.0
060.035.00.00.00.03.00.00.02.0231.04.09.00.0114.01.03.0
070.00.01.01.01.0228.00.0154.00.03.01.01.00.06.01.05.0
080.00.00.01.0102.054.020.061.03.00.00.00.060.023.067.011.0
0933.01.077.054.021.07.018.031.010.01.064.012.027.04.035.07.0
101.00.089.01.00.00.012.01.03.03.0187.01.05.00.099.00.0
110.00.08.01.00.01.01.01.077.076.0146.088.00.01.02.00.0
124.019.042.012.030.011.010.027.050.043.033.031.020.09.033.028.0
1337.017.040.010.054.014.07.07.055.038.011.014.025.022.039.012.0
1447.080.029.015.024.044.06.017.025.054.014.04.01.020.012.010.0
1511.046.028.012.043.059.017.079.06.028.016.011.07.015.017.07.0
PWM
AAACAGATCACCCGCTGAGCGGGTTATCTGTT
01-1.113-1.386-0.224-0.275-0.087-0.176-0.0451.34-1.386-0.3280.6810.299-1.241-1.5570.619-0.384
02-2.92-4.220.484-2.374-1.763-2.920.554-2.92-1.763-4.221.677-2.92-2.022-4.221.857-2.92
03-4.22-2.92-1.763-1.241-4.22-4.22-4.22-2.92-0.0870.6610.2392.397-4.22-2.022-4.22-2.374
04-2.022-2.374-2.374-0.443-0.899-2.92-2.3740.46-0.807-1.241-2.92-0.3840.5760.508-0.4431.994
05-0.899-2.920.382-0.176-1.386-4.22-1.0010.382-4.22-2.92-0.899-0.899-0.275-2.922.010.681
06-4.220.327-4.22-4.22-4.22-2.022-4.22-4.22-2.3742.205-1.763-1.001-4.221.501-2.92-2.022
07-4.22-4.22-2.92-2.92-2.922.192-4.221.801-4.22-2.022-2.92-2.92-4.22-1.386-2.92-1.557
08-4.22-4.22-4.22-2.921.390.757-0.2240.878-2.022-4.22-4.22-4.220.862-0.0870.972-0.807
090.269-2.921.110.757-0.176-1.241-0.3280.207-0.899-2.920.926-0.7230.071-1.7630.327-1.241
10-2.92-4.221.254-2.92-4.22-4.22-0.723-2.92-2.022-2.0221.994-2.92-1.557-4.221.36-4.22
11-4.22-4.22-1.113-2.92-4.22-2.92-2.92-2.921.111.0971.7481.243-4.22-2.92-2.374-4.22
12-1.763-0.2750.508-0.7230.175-0.807-0.8990.0710.6810.5310.2690.207-0.224-1.0010.2690.107
130.382-0.3840.46-0.8990.757-0.573-1.241-1.2410.7750.409-0.807-0.573-0.005-0.1310.434-0.723
140.6191.1480.141-0.506-0.0450.554-1.386-0.384-0.0050.757-0.573-1.763-2.92-0.224-0.723-0.899
15-0.8070.5980.107-0.7230.5310.845-0.3841.136-1.3860.107-0.443-0.807-1.241-0.506-0.384-1.241