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Model info
Transcription factorRUNX1
(GeneCards)
ModelRUNX1_HUMAN.H11DI.0.A
Model typeDinucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceChIP-Seq
Model releaseHOCOMOCOv11
Model length17
Quality
A
Motif rank
0
ConsensusnbTGTGGTYWbnbbnbn
Best auROC (human)0.966
Best auROC (mouse)0.985
Peak sets in benchmark (human)115
Peak sets in benchmark (mouse)63
Aligned words514
TF familyRunt-related factors {6.4.1}
TF subfamilyRunx1 (PEBP2alphaB, CBF-alpha2, AML-1) {6.4.1.0.2}
HGNCHGNC:10471
EntrezGeneGeneID:861
(SSTAR profile)
UniProt IDRUNX1_HUMAN
UniProt ACQ01196
(TFClass)
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 7.969860000000001
0.0005 10.44846
0.0001 15.17656
GTEx tissue expression atlas RUNX1 expression
ReMap ChIP-seq dataset list RUNX1 datasets
Motifs in JASPAR
MA0002.1 (RUNX1; Homo sapiens)
MA0002.2 (RUNX1; Mus musculus)
PCM
AAACAGATCACCCGCTGAGCGGGTTATCTGTT
017.034.021.017.014.059.08.042.027.084.018.022.02.070.016.057.0
027.03.01.039.013.020.02.0212.03.04.00.056.07.04.03.0124.0
031.00.027.02.00.00.031.00.00.00.06.00.00.02.0428.01.0
040.00.00.01.00.00.00.02.010.087.00.0395.00.00.00.03.0
050.00.010.00.00.00.087.00.00.00.00.00.00.00.0401.00.0
060.00.00.00.00.00.00.00.00.04.0494.00.00.00.00.00.0
070.00.00.00.00.00.00.04.01.068.025.0400.00.00.00.00.0
080.00.00.01.00.033.03.032.02.011.00.012.021.0111.032.0240.0
099.00.01.013.080.04.019.052.011.04.012.08.063.06.036.0180.0
1032.030.070.031.01.04.03.06.013.015.030.010.018.080.079.076.0
1113.016.025.010.014.053.08.054.032.043.043.064.010.041.044.028.0
1211.015.028.015.010.051.030.062.013.027.048.032.014.024.078.040.0
1311.08.012.017.021.024.016.056.027.024.064.069.014.019.061.055.0
1411.016.030.016.020.020.07.028.031.027.045.050.028.022.097.050.0
1520.014.034.022.024.017.012.032.017.023.095.044.017.028.052.047.0
1621.07.028.022.012.028.016.026.034.041.045.073.014.026.068.037.0
PWM
AAACAGATCACCCGCTGAGCGGGTTATCTGTT
01-1.4510.087-0.388-0.595-0.7840.634-1.3240.296-0.140.985-0.539-0.342-2.580.804-0.6540.599
02-1.451-2.23-3.1220.223-0.856-0.435-2.581.908-2.23-1.971-4.3970.582-1.451-1.971-2.231.373
03-3.122-4.397-0.14-2.58-4.397-4.397-0.004-4.397-4.397-4.397-1.596-4.397-4.397-2.582.61-3.122
04-4.397-4.397-4.397-3.122-4.397-4.397-4.397-2.58-1.111.02-4.3972.529-4.397-4.397-4.397-2.23
05-4.397-4.397-1.11-4.397-4.397-4.3971.02-4.397-4.397-4.397-4.397-4.397-4.397-4.3972.545-4.397
06-4.397-4.397-4.397-4.397-4.397-4.397-4.397-4.397-4.397-1.9712.753-4.397-4.397-4.397-4.397-4.397
07-4.397-4.397-4.397-4.397-4.397-4.397-4.397-1.971-3.1220.775-0.2162.542-4.397-4.397-4.397-4.397
08-4.397-4.397-4.397-3.122-4.3970.058-2.230.027-2.58-1.018-4.397-0.934-0.3881.2630.0272.032
09-1.211-4.397-3.122-0.8560.936-1.971-0.4860.508-1.018-1.971-0.934-1.3240.699-1.5960.1441.745
100.027-0.0360.804-0.004-3.122-1.971-2.23-1.596-0.856-0.717-0.036-1.11-0.5390.9360.9240.885
11-0.856-0.654-0.216-1.11-0.7840.527-1.3240.5460.0270.320.320.715-1.110.2730.343-0.104
12-1.018-0.717-0.104-0.717-1.110.489-0.0360.683-0.856-0.140.4290.027-0.784-0.2560.9110.248
13-1.018-1.324-0.934-0.595-0.388-0.256-0.6540.582-0.14-0.2560.7150.789-0.784-0.4860.6670.564
14-1.018-0.654-0.036-0.654-0.435-0.435-1.451-0.104-0.004-0.140.3650.469-0.104-0.3421.1280.469
15-0.435-0.7840.087-0.342-0.256-0.595-0.9340.027-0.595-0.2981.1080.343-0.595-0.1040.5080.408
16-0.388-1.451-0.104-0.342-0.934-0.104-0.654-0.1770.0870.2730.3650.845-0.784-0.1770.7750.171