We, Russian scientists of the autosome team, are depressed by the dire events caused by Russian military actions in Ukraine.
We express our condolences to all affected people and sincerely hope for a prompt transition to peace.
Model info
Transcription factorRUNX3
(GeneCards)
ModelRUNX3_HUMAN.H11MO.0.A
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceChIP-Seq
Model releaseHOCOMOCOv11
Model length10
Quality
A
Motif rank
0
ConsensusbhTGTGGTYd
Best auROC (human)0.997
Best auROC (mouse)0.966
Peak sets in benchmark (human)2
Peak sets in benchmark (mouse)27
Aligned words500
TF familyRunt-related factors {6.4.1}
TF subfamilyRunx3 (PEBP2alphaC, CBF-alpha3, AML-2) {6.4.1.0.3}
HGNCHGNC:10473
EntrezGeneGeneID:864
(SSTAR profile)
UniProt IDRUNX3_HUMAN
UniProt ACQ13761
(TFClass)
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 4.52173
0.0005 5.540455
0.0001 7.71481
GTEx tissue expression atlas RUNX3 expression
ReMap ChIP-seq dataset list RUNX3 datasets
Motifs in JASPAR
PCM
ACGT
0167.0106.0144.0183.0
0264.0196.033.0207.0
0318.07.012.0463.0
042.02.0493.03.0
0524.086.04.0386.0
061.00.0498.01.0
070.02.0497.01.0
080.027.018.0455.0
099.094.034.0363.0
10140.018.087.0255.0
PWM
ACGT
01-0.613-0.1630.140.377
02-0.6580.445-1.2980.5
03-1.868-2.694-2.2341.3
04-3.573-3.5731.363-3.325
05-1.6-0.368-3.1261.119
06-3.903-4.41.373-3.903
07-4.4-3.5731.371-3.903
08-4.4-1.489-1.8681.283
09-2.484-0.281-1.271.058
100.112-1.868-0.3570.707