We, Russian scientists of the autosome team, are depressed by the dire events caused by Russian military actions in Ukraine.
We express our condolences to all affected people and sincerely hope for a prompt transition to peace.
Model info
Transcription factorRunx3
ModelRUNX3_MOUSE.H11DI.0.A
Model typeDinucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceChIP-Seq
Model releaseHOCOMOCOv11
Model length15
Quality
A
Motif rank
0
ConsensusbnhTGTGGTbdnbvn
Best auROC (human)0.994
Best auROC (mouse)0.979
Peak sets in benchmark (human)2
Peak sets in benchmark (mouse)27
Aligned words198
TF familyRunt-related factors {6.4.1}
TF subfamilyRunx3 (PEBP2alphaC, CBF-alpha3, AML-2) {6.4.1.0.3}
MGIMGI:102672
EntrezGene
UniProt IDRUNX3_MOUSE
UniProt ACQ64131
(TFClass)
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 7.87856
0.0005 10.19961
0.0001 15.047509999999999
GTEx tissue expression atlas Runx3 expression
Motifs in JASPAR
PCM
AAACAGATCACCCGCTGAGCGGGTTATCTGTT
010.06.012.01.010.08.06.017.06.016.031.025.08.014.015.09.0
023.013.01.07.07.028.02.07.020.038.04.02.03.025.05.019.0
035.00.00.028.02.00.00.0102.01.00.00.011.03.01.00.031.0
040.00.011.00.00.00.01.00.00.00.00.00.03.00.0168.01.0
050.01.00.02.00.00.00.00.08.07.01.0164.00.00.00.01.0
060.00.08.00.00.00.08.00.00.00.01.00.00.01.0166.00.0
070.00.00.00.00.00.01.00.00.01.0182.00.00.00.00.00.0
080.00.00.00.00.00.00.01.00.02.08.0173.00.00.00.00.0
090.00.00.00.00.01.00.01.00.03.00.05.012.060.017.085.0
108.01.00.03.026.00.01.037.010.00.04.03.028.04.023.036.0
1117.018.029.08.01.01.01.02.05.06.05.012.09.013.032.025.0
127.010.014.01.06.018.04.010.010.026.016.015.00.07.030.010.0
132.09.010.02.019.026.04.012.015.018.023.08.00.07.025.04.0
143.09.014.010.019.014.07.020.02.012.028.020.01.08.015.02.0
PWM
AAACAGATCACCCGCTGAGCGGGTTATCTGTT
01-3.591-0.6260.041-2.188-0.136-0.351-0.6260.382-0.6260.3220.9740.762-0.3510.1920.259-0.237
02-1.2690.119-2.188-0.479-0.4790.873-1.626-0.4790.5421.176-1.006-1.626-1.2690.762-0.7980.491
03-0.798-3.591-3.5910.873-1.626-3.591-3.5912.158-2.188-3.591-3.591-0.043-1.269-2.188-3.5910.974
04-3.591-3.591-0.043-3.591-3.591-3.591-2.188-3.591-3.591-3.591-3.591-3.591-1.269-3.5912.656-2.188
05-3.591-2.188-3.591-1.626-3.591-3.591-3.591-3.591-0.351-0.479-2.1882.632-3.591-3.591-3.591-2.188
06-3.591-3.591-0.351-3.591-3.591-3.591-0.351-3.591-3.591-3.591-2.188-3.591-3.591-2.1882.644-3.591
07-3.591-3.591-3.591-3.591-3.591-3.591-2.188-3.591-3.591-2.1882.736-3.591-3.591-3.591-3.591-3.591
08-3.591-3.591-3.591-3.591-3.591-3.591-3.591-2.188-3.591-1.626-0.3512.685-3.591-3.591-3.591-3.591
09-3.591-3.591-3.591-3.591-3.591-2.188-3.591-2.188-3.591-1.269-3.591-0.7980.0411.6290.3821.976
10-0.351-2.188-3.591-1.2690.8-3.591-2.1881.149-0.136-3.591-1.006-1.2690.873-1.0060.6791.122
110.3820.4380.908-0.351-2.188-2.188-2.188-1.626-0.798-0.626-0.7980.041-0.2370.1191.0060.762
12-0.479-0.1360.192-2.188-0.6260.438-1.006-0.136-0.1360.80.3220.259-3.591-0.4790.942-0.136
13-1.626-0.237-0.136-1.6260.4910.8-1.0060.0410.2590.4380.679-0.351-3.591-0.4790.762-1.006
14-1.269-0.2370.192-0.1360.4910.192-0.4790.542-1.6260.0410.8730.542-2.188-0.3510.259-1.626