We, Russian scientists of the autosome team, are depressed by the dire events caused by Russian military actions in Ukraine.
We express our condolences to all affected people and sincerely hope for a prompt transition to peace.
Model info
Transcription factorRAX
(GeneCards)
ModelRX_HUMAN.H11MO.0.D
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceHT-SELEX
Model releaseHOCOMOCOv10
Model length11
Quality
D
Motif rank
0
ConsensushTAATTRvYhn
Best auROC (human)
Best auROC (mouse)
Peak sets in benchmark (human)
Peak sets in benchmark (mouse)
Aligned words340
TF familyPaired-related HD factors {3.1.3}
TF subfamilyRAX {3.1.3.22}
HGNCHGNC:18662
EntrezGeneGeneID:30062
(SSTAR profile)
UniProt IDRX_HUMAN
UniProt ACQ9Y2V3
(TFClass)
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 5.1997599999999995
0.0005 6.351685
0.0001 8.573765
GTEx tissue expression atlas RAX expression
ReMap ChIP-seq dataset list RAX datasets
Motifs in JASPAR
PCM
ACGT
0157.571.532.5173.5
0212.50.54.5317.5
03332.251.251.250.25
04333.250.251.250.25
050.01.00.0334.0
060.01.00.0334.0
07185.00.0144.06.0
08124.551.5147.511.5
0917.0162.014.0142.0
10142.2570.2522.25100.25
11161.2550.2550.2573.25
PWM
ACGT
01-0.368-0.155-0.920.719
02-1.809-3.775-2.6611.32
031.365-3.45-3.45-3.912
041.368-3.912-3.45-3.912
05-4.071-3.548-4.0711.37
06-4.071-3.548-4.0711.37
070.783-4.0710.535-2.436
080.391-0.4760.559-1.884
09-1.530.651-1.7070.521
100.523-0.173-1.2790.177
110.647-0.5-0.5-0.132