We, Russian scientists of the autosome team, are depressed by the dire events caused by Russian military actions in Ukraine.
We express our condolences to all affected people and sincerely hope for a prompt transition to peace.
Model info
Transcription factorSall1
ModelSALL1_MOUSE.H11DI.0.C
Model typeDinucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceChIP-Seq
Model releaseHOCOMOCOv11
Model length19
Quality
C
Motif rank
0
ConsensusnhhTYWRCAWhWvWRhdvn
Best auROC (human)
Best auROC (mouse)0.801
Peak sets in benchmark (human)
Peak sets in benchmark (mouse)3
Aligned words499
TF familyFactors with multiple dispersed zinc fingers {2.3.4}
TF subfamilySal-like factors {2.3.4.3}
MGIMGI:1889585
EntrezGene
UniProt IDSALL1_MOUSE
UniProt ACQ9ER74
(TFClass)
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 11.39726
0.0005 12.97991
0.0001 16.27071
GTEx tissue expression atlas Sall1 expression
Motifs in JASPAR
PCM
AAACAGATCACCCGCTGAGCGGGTTATCTGTT
0158.043.031.021.040.028.06.027.033.032.06.07.064.049.027.027.0
02109.015.026.045.0117.021.05.09.034.014.013.09.039.016.013.014.0
0319.010.012.0258.010.03.01.052.03.00.08.046.06.03.01.067.0
047.013.02.016.02.06.03.05.00.011.02.09.032.089.09.0293.0
0513.02.03.023.043.02.02.072.05.00.00.011.0122.06.015.0180.0
0655.015.097.016.02.04.03.01.07.04.08.01.078.017.0181.010.0
0724.0113.00.05.05.035.00.00.030.0245.03.011.014.013.01.00.0
0873.00.00.00.0386.06.02.012.02.01.00.01.011.00.05.00.0
0987.028.023.0334.04.00.00.03.01.01.00.05.02.00.01.010.0
1028.027.014.025.019.05.03.02.011.03.08.02.0141.062.042.0107.0
11119.013.05.062.042.03.05.047.037.04.00.026.036.024.06.070.0
1238.0122.042.032.011.022.08.03.01.010.02.03.034.064.092.015.0
1352.014.03.015.0157.015.01.045.0103.028.04.09.038.04.01.010.0
14307.011.028.04.045.04.08.04.02.03.04.00.043.04.017.015.0
15130.050.021.0196.09.06.01.06.016.016.08.017.05.05.01.012.0
1678.05.066.011.048.011.012.06.012.06.07.06.098.019.087.027.0
1742.071.097.026.011.014.03.013.036.053.068.015.012.017.016.05.0
1842.022.023.014.081.030.018.026.054.040.060.030.016.015.014.014.0
PWM
AAACAGATCACCCGCTGAGCGGGTTATCTGTT
010.6150.318-0.006-0.390.246-0.106-1.598-0.1420.0560.025-1.598-1.4520.7130.447-0.142-0.142
021.243-0.719-0.1790.3631.313-0.39-1.768-1.2130.085-0.786-0.858-1.2130.221-0.656-0.858-0.786
03-0.488-1.112-0.9362.102-1.112-2.232-3.1240.506-2.232-4.398-1.3260.385-1.598-2.232-3.1240.758
04-1.452-0.858-2.582-0.656-2.582-1.598-2.232-1.768-4.398-1.02-2.582-1.2130.0251.041-1.2132.229
05-0.858-2.582-2.232-0.30.318-2.582-2.5820.83-1.768-4.398-4.398-1.021.355-1.598-0.7191.743
060.562-0.7191.126-0.656-2.582-1.973-2.232-3.124-1.452-1.973-1.326-3.1240.909-0.5971.748-1.112
07-0.2581.278-4.398-1.768-1.7680.114-4.398-4.398-0.0382.05-2.232-1.02-0.786-0.858-3.124-4.398
080.843-4.398-4.398-4.3982.504-1.598-2.582-0.936-2.582-3.124-4.398-3.124-1.02-4.398-1.768-4.398
091.018-0.106-0.32.36-1.973-4.398-4.398-2.232-3.124-3.124-4.398-1.768-2.582-4.398-3.124-1.112
10-0.106-0.142-0.786-0.218-0.488-1.768-2.232-2.582-1.02-2.232-1.326-2.5821.4990.6810.2941.224
111.33-0.858-1.7680.6810.294-2.232-1.7680.4060.169-1.973-4.398-0.1790.142-0.258-1.5980.802
120.1951.3550.2940.025-1.02-0.344-1.326-2.232-3.124-1.112-2.582-2.2320.0850.7131.074-0.719
130.506-0.786-2.232-0.7191.606-0.719-3.1240.3631.186-0.106-1.973-1.2130.195-1.973-3.124-1.112
142.276-1.02-0.106-1.9730.363-1.973-1.326-1.973-2.582-2.232-1.973-4.3980.318-1.973-0.597-0.719
151.4180.467-0.391.828-1.213-1.598-3.124-1.598-0.656-0.656-1.326-0.597-1.768-1.768-3.124-0.936
160.909-1.7680.743-1.020.427-1.02-0.936-1.598-0.936-1.598-1.452-1.5981.137-0.4881.018-0.142
170.2940.8161.126-0.179-1.02-0.786-2.232-0.8580.1420.5250.773-0.719-0.936-0.597-0.656-1.768
180.294-0.344-0.3-0.7860.947-0.038-0.541-0.1790.5440.2460.648-0.038-0.656-0.719-0.786-0.786