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Model info
Transcription factorSOX10
(GeneCards)
ModelSOX10_HUMAN.H11DI.0.B
Model typeDinucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceChIP-Seq
Model releaseHOCOMOCOv11
Model length19
Quality
B
Motif rank
0
ConsensusdWhARdvvnbbCWTTGTbh
Best auROC (human)0.936
Best auROC (mouse)0.762
Peak sets in benchmark (human)3
Peak sets in benchmark (mouse)3
Aligned words503
TF familySOX-related factors {4.1.1}
TF subfamilyGroup E {4.1.1.5}
HGNCHGNC:11190
EntrezGeneGeneID:6663
(SSTAR profile)
UniProt IDSOX10_HUMAN
UniProt ACP56693
(TFClass)
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 9.60396
0.0005 11.748910000000002
0.0001 16.08706
GTEx tissue expression atlas SOX10 expression
ReMap ChIP-seq dataset list SOX10 datasets
Motifs in JASPAR
MA0442.1 (SOX10; Mus musculus/Rattus norvegicus/Homo sapiens)
MA0442.2 (SOX10; Homo sapiens)
PCM
AAACAGATCACCCGCTGAGCGGGTTATCTGTT
01144.041.010.052.056.02.02.013.088.01.00.011.037.010.022.011.0
0242.0208.07.068.051.01.01.01.030.00.02.02.030.028.021.08.0
03100.039.08.06.0228.01.07.01.027.00.01.03.054.00.025.00.0
04305.021.046.037.037.01.00.02.041.00.00.00.07.00.03.00.0
05128.012.093.0157.08.01.00.013.028.01.014.06.013.04.017.05.0
0656.013.092.016.07.03.05.03.031.024.055.014.048.011.0109.013.0
0744.027.066.05.019.021.08.03.0109.076.062.014.012.08.021.05.0
0825.047.055.057.018.050.019.045.039.058.042.018.07.08.08.04.0
0911.022.034.022.038.044.09.072.022.036.037.029.06.026.022.070.0
105.023.046.03.07.084.04.033.01.046.036.019.02.099.062.030.0
111.014.00.00.07.0221.01.023.06.0135.00.07.02.083.00.00.0
1210.01.02.03.0193.08.00.0252.00.00.00.01.011.00.00.019.0
130.012.09.0193.00.01.00.08.00.01.00.01.00.03.04.0268.0
140.00.00.00.00.00.00.017.00.00.00.013.00.00.00.0470.0
150.00.00.00.00.00.00.00.00.00.00.00.07.089.0403.01.0
160.00.00.07.037.02.026.024.013.02.01.0387.01.00.00.00.0
173.05.012.031.04.00.00.00.022.00.01.04.035.076.0109.0198.0
186.012.05.041.06.031.06.038.028.030.019.045.029.083.035.086.0
PWM
AAACAGATCACCCGCTGAGCGGGTTATCTGTT
011.5180.269-1.1140.5040.578-2.584-2.584-0.861.027-3.126-4.4-1.0220.167-1.114-0.346-1.022
020.2931.885-1.4540.7710.485-3.126-3.126-3.126-0.04-4.4-2.584-2.584-0.04-0.108-0.392-1.328
031.1550.219-1.328-1.61.977-3.126-1.454-3.126-0.144-4.4-3.126-2.2340.542-4.4-0.22-4.4
042.267-0.3920.3830.1670.167-3.126-4.4-2.5840.269-4.4-4.4-4.4-1.454-4.4-2.234-4.4
051.401-0.9381.0821.604-1.328-3.126-4.4-0.86-0.108-3.126-0.788-1.6-0.86-1.975-0.599-1.77
060.578-0.861.072-0.658-1.454-2.234-1.77-2.234-0.008-0.260.56-0.7880.425-1.0221.241-0.86
070.339-0.1440.741-1.77-0.49-0.392-1.328-2.2341.2410.8810.679-0.788-0.938-1.328-0.392-1.77
08-0.220.4040.560.595-0.5430.465-0.490.3610.2190.6130.293-0.543-1.454-1.328-1.328-1.975
09-1.022-0.3460.083-0.3460.1930.339-1.2150.828-0.3460.140.167-0.074-1.6-0.181-0.3460.8
10-1.77-0.3020.383-2.234-1.4540.981-1.9750.054-3.1260.3830.14-0.49-2.5841.1450.679-0.04
11-3.126-0.788-4.4-4.4-1.4541.946-3.126-0.302-1.61.454-4.4-1.454-2.5840.969-4.4-4.4
12-1.114-3.126-2.584-2.2341.81-1.328-4.42.077-4.4-4.4-4.4-3.126-1.022-4.4-4.4-0.49
13-4.4-0.938-1.2151.81-4.4-3.126-4.4-1.328-4.4-3.126-4.4-3.126-4.4-2.234-1.9752.138
14-4.4-4.4-4.4-4.4-4.4-4.4-4.4-0.599-4.4-4.4-4.4-0.86-4.4-4.4-4.42.699
15-4.4-4.4-4.4-4.4-4.4-4.4-4.4-4.4-4.4-4.4-4.4-4.4-1.4541.0392.546-3.126
16-4.4-4.4-4.4-1.4540.167-2.584-0.181-0.26-0.86-2.584-3.1262.505-3.126-4.4-4.4-4.4
17-2.234-1.77-0.938-0.008-1.975-4.4-4.4-4.4-0.346-4.4-3.126-1.9750.1120.8811.2411.836
18-1.6-0.938-1.770.269-1.6-0.008-1.60.193-0.108-0.04-0.490.361-0.0740.9690.1121.004