We, Russian scientists of the autosome team, are depressed by the dire events caused by Russian military actions in Ukraine.
We express our condolences to all affected people and sincerely hope for a prompt transition to peace.
Model info
Transcription factorSox10
ModelSOX10_MOUSE.H11DI.0.B
Model typeDinucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceChIP-Seq
Model releaseHOCOMOCOv11
Model length19
Quality
B
Motif rank
0
ConsensushvARdvvnnbCWTTGTbbn
Best auROC (human)0.936
Best auROC (mouse)0.781
Peak sets in benchmark (human)3
Peak sets in benchmark (mouse)3
Aligned words502
TF family
TF subfamily
MGIMGI:98358
EntrezGeneGeneID:20665
(SSTAR profile)
UniProt IDSOX10_MOUSE
UniProt ACQ04888
(TFClass)
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 10.11781
0.0005 12.19021
0.0001 16.39346
GTEx tissue expression atlas Sox10 expression
Motifs in JASPAR
MA0442.1 (SOX10; Mus musculus/Rattus norvegicus/Homo sapiens)
MA0442.2 (SOX10; Homo sapiens)
PCM
AAACAGATCACCCGCTGAGCGGGTTATCTGTT
0130.0159.021.032.063.04.00.06.052.05.02.04.034.044.037.07.0
02121.034.019.05.0197.03.010.02.058.00.02.00.040.02.07.00.0
03306.029.044.037.038.00.00.01.030.01.04.03.02.00.03.02.0
04159.014.080.0123.015.01.00.014.024.04.014.09.012.06.012.013.0
0557.018.0106.029.012.02.07.04.035.026.043.02.043.020.086.010.0
0642.031.065.09.023.024.08.011.084.054.091.013.022.05.017.01.0
0741.028.052.050.046.029.010.029.053.048.056.024.08.010.08.08.0
0830.029.061.028.026.041.011.037.027.031.041.027.015.014.029.053.0
099.029.043.017.012.060.09.034.06.050.065.021.02.071.049.023.0
100.025.00.04.010.0172.01.027.04.0143.03.016.01.091.02.01.0
1111.02.00.02.0190.016.01.0224.04.00.00.02.022.00.02.024.0
120.018.06.0203.00.01.00.017.00.00.00.03.00.015.02.0235.0
130.00.00.00.00.00.00.034.00.00.00.08.00.00.01.0457.0
140.00.00.00.00.00.00.00.00.00.01.00.05.046.0448.00.0
150.00.01.04.03.02.014.027.06.04.05.0434.00.00.00.00.0
161.01.02.05.05.01.00.00.018.01.00.01.054.093.079.0239.0
176.016.011.045.04.044.03.045.05.024.05.047.016.0104.024.0101.0
187.09.09.06.052.048.04.084.08.08.012.015.024.059.084.071.0
PWM
AAACAGATCACCCGCTGAGCGGGTTATCTGTT
01-0.041.617-0.3920.0230.695-1.975-4.4-1.60.504-1.77-2.584-1.9750.0830.3390.167-1.454
021.3450.083-0.49-1.771.831-2.234-1.114-2.5840.613-4.4-2.584-4.40.244-2.584-1.454-4.4
032.27-0.0740.3390.1670.193-4.4-4.4-3.126-0.04-3.126-1.975-2.234-2.584-4.4-2.234-2.584
041.617-0.7880.9321.361-0.721-3.126-4.4-0.788-0.26-1.975-0.788-1.215-0.938-1.6-0.938-0.86
050.595-0.5431.213-0.074-0.938-2.584-1.454-1.9750.112-0.1810.316-2.5840.316-0.4391.004-1.114
060.293-0.0080.726-1.215-0.302-0.26-1.328-1.0220.9810.5421.061-0.86-0.346-1.77-0.599-3.126
070.269-0.1080.5040.4650.383-0.074-1.114-0.0740.5230.4250.578-0.26-1.328-1.114-1.328-1.328
08-0.04-0.0740.663-0.108-0.1810.269-1.0220.167-0.144-0.0080.269-0.144-0.721-0.788-0.0740.523
09-1.215-0.0740.316-0.599-0.9380.646-1.2150.083-1.60.4650.726-0.392-2.5840.8140.445-0.302
10-4.4-0.22-4.4-1.975-1.1141.695-3.126-0.144-1.9751.511-2.234-0.658-3.1261.061-2.584-3.126
11-1.022-2.584-4.4-2.5841.795-0.658-3.1261.959-1.975-4.4-4.4-2.584-0.346-4.4-2.584-0.26
12-4.4-0.543-1.61.861-4.4-3.126-4.4-0.599-4.4-4.4-4.4-2.234-4.4-0.721-2.5842.007
13-4.4-4.4-4.4-4.4-4.4-4.4-4.40.083-4.4-4.4-4.4-1.328-4.4-4.4-3.1262.671
14-4.4-4.4-4.4-4.4-4.4-4.4-4.4-4.4-4.4-4.4-3.126-4.4-1.770.3832.651-4.4
15-4.4-4.4-3.126-1.975-2.234-2.584-0.788-0.144-1.6-1.975-1.772.62-4.4-4.4-4.4-4.4
16-3.126-3.126-2.584-1.77-1.77-3.126-4.4-4.4-0.543-3.126-4.4-3.1260.5421.0820.922.024
17-1.6-0.658-1.0220.361-1.9750.339-2.2340.361-1.77-0.26-1.770.404-0.6581.194-0.261.165
18-1.454-1.215-1.215-1.60.5040.425-1.9750.981-1.328-1.328-0.938-0.721-0.260.630.9810.814