We, Russian scientists of the autosome team, are depressed by the dire events caused by Russian military actions in Ukraine.
We express our condolences to all affected people and sincerely hope for a prompt transition to peace.
Model info
Transcription factorSOX15
(GeneCards)
ModelSOX15_HUMAN.H11MO.0.D
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceIntegrative
Model releaseHOCOMOCOv9
Model length7
Quality
D
Motif rank
0
ConsensusCWTTGTT
Best auROC (human)
Best auROC (mouse)
Peak sets in benchmark (human)
Peak sets in benchmark (mouse)
Aligned words8
TF familySOX-related factors {4.1.1}
TF subfamilyGroup G {4.1.1.7}
HGNCHGNC:11196
EntrezGeneGeneID:6665
(SSTAR profile)
UniProt IDSOX15_HUMAN
UniProt ACO60248
(TFClass)
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 5.093
0.0005 5.940525
0.0001 7.28455
GTEx tissue expression atlas SOX15 expression
ReMap ChIP-seq dataset list SOX15 datasets
Motifs in JASPAR
PCM
ACGT
010.08.00.00.0
024.1141.0290.02.857
030.00.00.08.0
040.00.00.08.0
050.00.08.00.0
060.00.01.0296.971
071.1710.2570.2576.314
PWM
ACGT
01-1.5781.218-1.578-1.578
020.609-0.487-1.5780.293
03-1.578-1.578-1.5781.218
04-1.578-1.578-1.5781.218
05-1.578-1.5781.218-1.578
06-1.578-1.578-0.4871.09
07-0.399-1.177-1.1770.998