We, Russian scientists of the autosome team, are depressed by the dire events caused by Russian military actions in Ukraine.
We express our condolences to all affected people and sincerely hope for a prompt transition to peace.
Model info
Transcription factorSP1
(GeneCards)
ModelSP1_HUMAN.H11DI.0.A
Model typeDinucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceChIP-Seq
Model releaseHOCOMOCOv11
Model length27
Quality
A
Motif rank
0
ConsensusnRKGGGCGGGGCbdSSvbSSSSvvSSS
Best auROC (human)1.0
Best auROC (mouse)0.955
Peak sets in benchmark (human)53
Peak sets in benchmark (mouse)11
Aligned words514
TF familyThree-zinc finger Krüppel-related factors {2.3.1}
TF subfamilySp1-like factors {2.3.1.1}
HGNCHGNC:11205
EntrezGeneGeneID:6667
(SSTAR profile)
UniProt IDSP1_HUMAN
UniProt ACP08047
(TFClass)
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 -9.14254
0.0005 -6.35919
0.0001 -0.32244
GTEx tissue expression atlas SP1 expression
ReMap ChIP-seq dataset list SP1 datasets
Motifs in JASPAR
MA0079.1 (SP1; Homo sapiens)
MA0079.2 (SP1; Mus musculus/Rattus norvegicus/Homo sapiens)
MA0079.3 (SP1; Homo sapiens)
PCM
AAACAGATCACCCGCTGAGCGGGTTATCTGTT
0120.08.0105.01.019.09.0103.01.033.055.064.011.09.05.053.04.0
020.02.069.010.03.00.062.012.020.05.0236.064.00.01.015.01.0
033.00.019.01.01.00.07.00.019.01.0362.00.04.01.082.00.0
040.00.027.00.00.02.00.00.00.02.0468.00.00.00.01.00.0
050.00.00.00.00.00.04.00.00.00.0496.00.00.00.00.00.0
060.00.00.00.00.00.00.00.015.0478.00.07.00.00.00.00.0
070.00.014.01.04.01.0469.04.00.00.00.00.00.00.07.00.0
080.00.03.01.00.00.01.00.00.00.0458.032.00.00.04.01.0
090.00.00.00.00.00.00.00.023.01.0435.07.02.00.032.00.0
100.00.025.00.00.01.00.00.021.020.0417.09.01.01.05.00.0
112.017.02.01.03.015.01.03.026.0381.08.032.00.08.01.00.0
123.09.016.03.016.0226.0107.072.00.09.03.00.01.026.02.07.0
133.00.015.02.034.026.0123.087.013.012.090.013.03.012.038.029.0
1411.04.034.04.015.07.020.08.032.045.0183.06.018.028.075.010.0
159.09.049.09.012.024.045.03.034.044.0223.011.07.06.015.00.0
1611.03.041.07.017.010.048.08.045.090.0176.021.02.06.012.03.0
179.016.046.04.03.024.071.011.026.0123.0105.023.03.010.022.04.0
186.04.024.07.011.024.0122.016.027.054.0150.013.02.08.025.07.0
194.06.034.02.04.019.061.06.031.048.0221.021.04.04.028.07.0
207.07.029.00.08.010.052.07.028.038.0263.015.010.014.010.02.0
215.017.031.00.09.012.037.011.034.075.0236.09.01.04.018.01.0
229.09.029.02.014.030.056.08.044.0124.0136.018.01.03.012.05.0
2313.04.046.05.022.041.087.016.017.072.0127.017.05.05.019.04.0
247.013.031.06.011.011.089.011.014.055.0173.037.02.07.029.04.0
254.05.024.01.04.019.052.011.022.052.0229.019.02.011.041.04.0
262.06.020.04.05.029.045.08.028.090.0214.014.05.07.022.01.0
PWM
AAACAGATCACCCGCTGAGCGGGTTATCTGTT
01-0.439-1.3281.203-3.126-0.49-1.2151.184-3.1260.0540.560.711-1.022-1.215-1.770.523-1.975
02-4.4-2.5840.785-1.114-2.234-4.40.679-0.938-0.439-1.772.0110.711-4.4-3.126-0.721-3.126
03-2.234-4.4-0.49-3.126-3.126-4.4-1.454-4.4-0.49-3.1262.438-4.4-1.975-3.1260.957-4.4
04-4.4-4.4-0.144-4.4-4.4-2.584-4.4-4.4-4.4-2.5842.695-4.4-4.4-4.4-3.126-4.4
05-4.4-4.4-4.4-4.4-4.4-4.4-1.975-4.4-4.4-4.42.753-4.4-4.4-4.4-4.4-4.4
06-4.4-4.4-4.4-4.4-4.4-4.4-4.4-4.4-0.7212.716-4.4-1.454-4.4-4.4-4.4-4.4
07-4.4-4.4-0.788-3.126-1.975-3.1262.697-1.975-4.4-4.4-4.4-4.4-4.4-4.4-1.454-4.4
08-4.4-4.4-2.234-3.126-4.4-4.4-3.126-4.4-4.4-4.42.6730.023-4.4-4.4-1.975-3.126
09-4.4-4.4-4.4-4.4-4.4-4.4-4.4-4.4-0.302-3.1262.622-1.454-2.584-4.40.023-4.4
10-4.4-4.4-0.22-4.4-4.4-3.126-4.4-4.4-0.392-0.4392.58-1.215-3.126-3.126-1.77-4.4
11-2.584-0.599-2.584-3.126-2.234-0.721-3.126-2.234-0.1812.489-1.3280.023-4.4-1.328-3.126-4.4
12-2.234-1.215-0.658-2.234-0.6581.9681.2220.828-4.4-1.215-2.234-4.4-3.126-0.181-2.584-1.454
13-2.234-4.4-0.721-2.5840.083-0.1811.3611.016-0.86-0.9381.05-0.86-2.234-0.9380.193-0.074
14-1.022-1.9750.083-1.975-0.721-1.454-0.439-1.3280.0230.3611.757-1.6-0.543-0.1080.868-1.114
15-1.215-1.2150.445-1.215-0.938-0.260.361-2.2340.0830.3391.955-1.022-1.454-1.6-0.721-4.4
16-1.022-2.2340.269-1.454-0.599-1.1140.425-1.3280.3611.051.718-0.392-2.584-1.6-0.938-2.234
17-1.215-0.6580.383-1.975-2.234-0.260.814-1.022-0.1811.3611.203-0.302-2.234-1.114-0.346-1.975
18-1.6-1.975-0.26-1.454-1.022-0.261.353-0.658-0.1440.5421.559-0.86-2.584-1.328-0.22-1.454
19-1.975-1.60.083-2.584-1.975-0.490.663-1.6-0.0080.4251.946-0.392-1.975-1.975-0.108-1.454
20-1.454-1.454-0.074-4.4-1.328-1.1140.504-1.454-0.1080.1932.119-0.721-1.114-0.788-1.114-2.584
21-1.77-0.599-0.008-4.4-1.215-0.9380.167-1.0220.0830.8682.011-1.215-3.126-1.975-0.543-3.126
22-1.215-1.215-0.074-2.584-0.788-0.040.578-1.3280.3391.3691.461-0.543-3.126-2.234-0.938-1.77
23-0.86-1.9750.383-1.77-0.3460.2691.016-0.658-0.5990.8281.393-0.599-1.77-1.77-0.49-1.975
24-1.454-0.86-0.008-1.6-1.022-1.0221.039-1.022-0.7880.561.7010.167-2.584-1.454-0.074-1.975
25-1.975-1.77-0.26-3.126-1.975-0.490.504-1.022-0.3460.5041.981-0.49-2.584-1.0220.269-1.975
26-2.584-1.6-0.439-1.975-1.77-0.0740.361-1.328-0.1081.051.913-0.788-1.77-1.454-0.346-3.126