We, Russian scientists of the autosome team, are depressed by the dire events caused by Russian military actions in Ukraine.
We express our condolences to all affected people and sincerely hope for a prompt transition to peace.
Model info
Transcription factorSP2
(GeneCards)
ModelSP2_HUMAN.H11DI.0.A
Model typeDinucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceChIP-Seq
Model releaseHOCOMOCOv10
Model length23
Quality
A
Motif rank
0
ConsensusvvvvbvRRRGGCGGRRSbdvvvb
Best auROC (human)0.978
Best auROC (mouse)
Peak sets in benchmark (human)16
Peak sets in benchmark (mouse)
Aligned words501
TF familyThree-zinc finger Kr├╝ppel-related factors {2.3.1}
TF subfamilySp1-like factors {2.3.1.1}
HGNCHGNC:11207
EntrezGeneGeneID:6668
(SSTAR profile)
UniProt IDSP2_HUMAN
UniProt ACQ02086
(TFClass)
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 0.74431
0.0005 2.8315099999999997
0.0001 7.300160000000001
GTEx tissue expression atlas SP2 expression
ReMap ChIP-seq dataset list SP2 datasets
Motifs in JASPAR
PCM
AAACAGATCACCCGCTGAGCGGGTTATCTGTT
0112.9913.31148.5351.14724.62552.99280.10912.48134.45247.03995.1097.3994.24818.76931.1397.803
0217.11618.10938.2942.79521.33929.26763.63617.8746.02371.283112.58325.0045.62811.999.1312.08
0314.13717.56956.5981.80210.63336.18659.08924.74226.71957.347122.35617.2213.0088.58328.527.638
0413.99312.86721.9115.7267.11339.49645.69927.37636.31197.576107.43125.2463.44111.15627.3639.442
0525.4323.15930.3231.94427.69940.90366.05526.43969.62757.73761.1313.9111.1512.04829.43215.16
0637.0297.15385.564.16617.45720.96164.88810.5456.56531.77889.2339.3645.3178.11542.0911.931
079.9014.40889.41112.6479.6823.96744.6879.67139.01618.598207.63616.5220.02.24519.7593.998
0821.9473.18132.4331.0377.9361.95216.9142.41684.40727.569243.7035.8143.1261.09736.2122.404
095.4581.139108.6282.1912.0040.91730.8780.06.2974.3312.6276.0382.2170.09.4550.0
101.2270.014.750.00.00.06.3570.01.0688.429452.090.00.00.08.2280.0
110.01.2270.01.0680.08.4290.00.013.489450.6393.71413.5830.00.00.00.0
120.00.013.4890.09.0476.073444.2470.9260.00.03.7140.00.00.014.6520.0
131.1540.06.8111.0830.00.05.2050.8693.4057.773449.38415.540.00.00.9260.0
140.01.2723.2870.01.2263.2270.03.3247.46229.843367.6617.3592.0760.014.41.015
159.0512.15938.5820.9735.1713.43323.6952.04586.17965.3220.59213.2761.1381.90218.6540.0
1613.75975.8711.9110.08.83550.91611.0951.94738.348216.44437.4999.2310.9738.4894.7552.077
1713.87822.24819.9335.85632.578158.80386.72873.619.71728.63113.76513.1470.03.8276.6722.756
189.6486.2937.2892.94637.80838.00175.47562.22627.53418.63966.75214.17314.18717.63620.63642.908
1930.04210.94741.7596.42918.99315.69633.19512.68155.4159.78266.60318.3578.45357.15642.4814.164
2024.67719.36664.4694.38615.25648.01267.61312.70120.4352.613104.9656.036.59916.09826.2032.732
2117.0683.20445.6930.9962.87426.25390.316.66256.14165.085124.23517.7881.1182.72719.9712.033
2214.7221.09338.5862.80210.24527.66639.72819.6333.39780.207133.04433.5526.1116.94915.6848.735
PWM
AAACAGATCACCCGCTGAGCGGGTTATCTGTT
01-0.845-0.8210.452-3.01-0.2190.5390.95-0.8840.1120.421.12-1.386-1.905-0.4860.012-1.336
02-0.576-0.5210.217-2.281-0.36-0.0490.721-0.5340.3990.8331.288-0.204-1.644-0.923-1.185-2.535
03-0.763-0.5510.604-2.655-1.0390.1610.647-0.215-0.1390.6171.371-0.57-2.216-1.245-0.075-1.356
04-0.773-0.854-0.334-1.628-1.4240.2470.392-0.1150.1641.1461.242-0.195-2.096-0.993-0.115-1.153
05-0.188-2.173-0.014-2.592-0.1030.2820.758-0.1490.810.6240.681-0.779-0.993-0.918-0.044-0.695
060.183-1.4181.015-1.923-0.557-0.3780.74-1.0470.6040.0321.057-1.161-1.698-1.2980.31-2.598
07-1.108-1.8711.059-0.871-1.129-1.9670.37-1.130.235-0.4951.899-0.611-4.387-2.471-0.436-1.961
08-0.333-2.1660.052-3.085-1.32-2.589-0.588-2.4081.002-0.1082.059-1.614-2.182-3.0440.161-2.412
09-1.673-3.0161.253-2.492-2.567-3.1730.004-4.387-1.539-1.8942.308-1.579-2.481-4.387-1.152-4.387
10-2.96-4.387-0.722-4.387-4.387-4.387-1.53-4.387-3.063-1.2622.676-4.387-4.387-4.387-1.285-4.387
11-4.387-2.96-4.387-3.063-4.387-1.262-4.387-4.387-0.8082.673-2.027-0.802-4.387-4.387-4.387-4.387
12-4.387-4.387-0.808-4.387-1.194-1.5732.659-3.166-4.387-4.387-2.027-4.387-4.387-4.387-0.728-4.387
13-3.006-4.387-1.465-3.053-4.387-4.387-1.717-3.211-2.106-1.3392.67-0.671-4.387-4.387-3.166-4.387
14-4.387-2.932-2.137-4.387-2.96-2.154-4.387-2.1280.429-0.032.47-0.562-2.537-4.387-0.745-3.1
15-1.194-2.5040.224-3.131-1.723-2.098-0.257-2.551.0220.7461.959-0.824-3.016-2.61-0.492-4.387
16-0.7890.895-0.929-4.387-1.2170.499-0.998-2.5910.2181.940.196-1.175-3.131-1.255-1.801-2.537
17-0.781-0.319-0.427-1.6070.0571.6311.0290.865-1.126-0.071-0.789-0.833-4.387-2.0-1.484-2.294
18-1.133-1.540.19-2.2350.2040.2090.890.698-0.109-0.4930.768-0.76-0.759-0.547-0.3930.329
19-0.023-1.0110.302-1.519-0.474-0.6610.075-0.8690.5830.6580.766-0.508-1.2590.6140.319-0.761
20-0.217-0.4550.733-1.876-0.6890.4410.781-0.867-0.4030.5321.219-1.58-1.495-0.636-0.158-2.301
21-0.579-2.160.392-3.114-2.257-0.1561.069-0.6030.5960.7431.387-0.539-3.029-2.303-0.425-2.555
22-0.724-0.3720.224-2.279-1.075-0.1050.253-0.4420.0810.9511.4550.086-1.567-1.446-0.662-1.228