We, Russian scientists of the autosome team, are depressed by the dire events caused by Russian military actions in Ukraine.
We express our condolences to all affected people and sincerely hope for a prompt transition to peace.
Model info
Transcription factorSP4
(GeneCards)
ModelSP4_HUMAN.H11DI.0.A
Model typeDinucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceChIP-Seq
Model releaseHOCOMOCOv11
Model length27
Quality
A
Motif rank
0
ConsensusvRvdRRRGGMGGRGvndRRRRvRRRvv
Best auROC (human)0.987
Best auROC (mouse)
Peak sets in benchmark (human)5
Peak sets in benchmark (mouse)
Aligned words497
TF familyThree-zinc finger Kr├╝ppel-related factors {2.3.1}
TF subfamilySp1-like factors {2.3.1.1}
HGNCHGNC:11209
EntrezGeneGeneID:6671
(SSTAR profile)
UniProt IDSP4_HUMAN
UniProt ACQ02446
(TFClass)
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 2.3724099999999995
0.0005 4.78416
0.0001 9.920110000000001
GTEx tissue expression atlas SP4 expression
ReMap ChIP-seq dataset list SP4 datasets
Motifs in JASPAR
PCM
AAACAGATCACCCGCTGAGCGGGTTATCTGTT
0116.010.070.04.029.012.055.014.030.022.0179.06.03.00.040.02.0
0216.013.043.06.011.09.018.06.095.046.0167.036.07.00.017.02.0
0354.04.060.011.014.05.027.022.0135.020.073.017.016.05.023.06.0
0473.06.0128.012.014.04.013.03.084.016.066.017.08.01.042.05.0
0530.01.0133.015.03.01.020.03.038.06.0157.048.08.00.022.07.0
0614.00.061.04.03.00.05.00.0101.07.0221.03.01.01.071.00.0
072.00.0117.00.02.00.05.01.01.01.0355.01.00.00.07.00.0
082.00.03.00.00.00.01.00.03.05.0472.04.00.00.02.00.0
092.03.00.00.01.02.00.02.0138.0297.00.043.00.04.00.00.0
1017.00.0122.02.03.03.0291.09.00.00.00.00.03.00.041.01.0
111.00.019.03.00.00.03.00.010.09.0407.028.00.00.011.01.0
124.00.06.01.02.00.07.00.0125.01.0300.014.01.01.030.00.0
1313.00.0116.03.01.00.01.00.060.06.0269.08.02.02.011.00.0
1425.034.013.04.03.01.02.02.0104.0213.046.034.01.07.03.00.0
1541.023.048.021.021.096.040.098.024.017.06.017.03.014.07.016.0
1617.09.053.010.040.014.054.042.038.08.048.07.034.09.080.029.0
1729.010.084.06.010.010.015.05.042.026.0155.012.023.09.044.012.0
1818.07.074.05.026.06.020.03.086.032.0155.025.011.01.022.01.0
1930.017.089.05.07.05.031.03.067.036.0156.012.012.01.018.03.0
2027.06.077.06.015.014.026.04.063.034.0186.011.03.03.014.03.0
2128.08.060.012.019.06.019.013.096.062.0118.027.09.01.010.04.0
2243.05.099.05.017.08.039.013.055.029.0105.018.08.04.038.06.0
2320.014.082.07.06.06.021.013.052.025.0177.027.06.03.021.012.0
2422.06.053.03.010.07.027.04.0122.034.0134.011.08.07.044.00.0
2541.016.0102.03.010.08.029.07.066.041.0129.022.01.03.011.03.0
2627.026.054.011.024.010.030.04.034.056.0154.027.06.011.014.04.0
PWM
AAACAGATCACCCGCTGAGCGGGTTATCTGTT
01-0.642-1.0980.816-1.96-0.058-0.9220.576-0.772-0.024-0.331.751-1.584-2.218-4.3870.26-2.568
02-0.642-0.8440.332-1.584-1.006-1.199-0.527-1.5841.120.3991.6820.156-1.439-4.387-0.583-2.568
030.558-1.960.662-1.006-0.772-1.754-0.128-0.331.47-0.4230.857-0.583-0.642-1.754-0.286-1.584
040.857-1.5841.417-0.922-0.772-1.96-0.844-2.2180.997-0.6420.757-0.583-1.312-3.1110.308-1.754
05-0.024-3.1111.455-0.705-2.218-3.111-0.423-2.2180.209-1.5841.620.441-1.312-4.387-0.33-1.439
06-0.772-4.3870.679-1.96-2.218-4.387-1.754-4.3871.181-1.4391.962-2.218-3.111-3.1110.83-4.387
07-2.568-4.3871.327-4.387-2.568-4.387-1.754-3.111-3.111-3.1112.435-3.111-4.387-4.387-1.439-4.387
08-2.568-4.387-2.218-4.387-4.387-4.387-3.111-4.387-2.218-1.7542.719-1.96-4.387-4.387-2.568-4.387
09-2.568-2.218-4.387-4.387-3.111-2.568-4.387-2.5681.4922.257-4.3870.332-4.387-1.96-4.387-4.387
10-0.583-4.3871.369-2.568-2.218-2.2182.236-1.199-4.387-4.387-4.387-4.387-2.218-4.3870.285-3.111
11-3.111-4.387-0.474-2.218-4.387-4.387-2.218-4.387-1.098-1.1992.571-0.092-4.387-4.387-1.006-3.111
12-1.96-4.387-1.584-3.111-2.568-4.387-1.439-4.3871.393-3.1112.267-0.772-3.111-3.111-0.024-4.387
13-0.844-4.3871.319-2.218-3.111-4.387-3.111-4.3870.662-1.5842.158-1.312-2.568-2.568-1.006-4.387
14-0.2040.099-0.844-1.96-2.218-3.111-2.568-2.5681.211.9250.3990.099-3.111-1.439-2.218-4.387
150.285-0.2860.441-0.376-0.3761.130.261.151-0.244-0.583-1.584-0.583-2.218-0.772-1.439-0.642
16-0.583-1.1990.539-1.0980.26-0.7720.5580.3080.209-1.3120.441-1.4390.099-1.1990.948-0.058
17-0.058-1.0980.997-1.584-1.098-1.098-0.705-1.7540.308-0.1661.608-0.922-0.286-1.1990.355-0.922
18-0.527-1.4390.871-1.754-0.166-1.584-0.423-2.2181.020.0391.608-0.204-1.006-3.111-0.33-3.111
19-0.024-0.5831.055-1.754-1.439-1.7540.008-2.2180.7720.1561.614-0.922-0.922-3.111-0.527-2.218
20-0.128-1.5840.91-1.584-0.705-0.772-0.166-1.960.7110.0991.789-1.006-2.218-2.218-0.772-2.218
21-0.092-1.3120.662-0.922-0.474-1.584-0.474-0.8441.130.6951.336-0.128-1.199-3.111-1.098-1.96
220.332-1.7541.161-1.754-0.583-1.3120.235-0.8440.576-0.0581.219-0.527-1.312-1.960.209-1.584
23-0.423-0.7720.973-1.439-1.584-1.584-0.376-0.8440.52-0.2041.74-0.128-1.584-2.218-0.376-0.922
24-0.33-1.5840.539-2.218-1.098-1.439-0.128-1.961.3690.0991.462-1.006-1.312-1.4390.355-4.387
250.285-0.6421.19-2.218-1.098-1.312-0.058-1.4390.7570.2851.424-0.33-3.111-2.218-1.006-2.218
26-0.128-0.1660.558-1.006-0.244-1.098-0.024-1.960.0990.5941.601-0.128-1.584-1.006-0.772-1.96