We, Russian scientists of the autosome team, are depressed by the dire events caused by Russian military actions in Ukraine.
We express our condolences to all affected people and sincerely hope for a prompt transition to peace.
Model info
Transcription factorSp5
ModelSP5_MOUSE.H11DI.0.C
Model typeDinucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceChIP-Seq
Model releaseHOCOMOCOv11
Model length27
Quality
C
Motif rank
0
ConsensusdddRRvvRRRvdRKGGGMGGRGhdvvd
Best auROC (human)
Best auROC (mouse)0.966
Peak sets in benchmark (human)
Peak sets in benchmark (mouse)3
Aligned words511
TF familyThree-zinc finger Kr├╝ppel-related factors {2.3.1}
TF subfamilySp1-like factors {2.3.1.1}
MGIMGI:1927715
EntrezGeneGeneID:64406
(SSTAR profile)
UniProt IDSP5_MOUSE
UniProt ACQ9JHX2
(TFClass)
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 4.11456
0.0005 6.4528099999999995
0.0001 11.468160000000001
GTEx tissue expression atlas Sp5 expression
Motifs in JASPAR
PCM
AAACAGATCACCCGCTGAGCGGGTTATCTGTT
0124.06.068.011.021.014.020.020.051.019.0116.046.011.09.034.026.0
0220.09.075.03.011.013.014.010.098.018.095.027.011.013.061.018.0
0318.09.0104.09.014.011.08.020.044.025.0156.020.08.08.033.09.0
0415.08.060.01.013.011.09.020.044.024.0223.010.04.010.036.08.0
0524.014.036.02.024.08.014.07.0136.037.0126.029.06.05.023.05.0
0636.016.0127.011.027.04.021.012.047.038.095.019.05.03.030.05.0
0719.014.071.011.014.09.031.07.058.031.0165.019.08.02.029.08.0
0810.05.079.05.023.05.024.04.086.026.0170.014.03.03.035.04.0
0923.06.091.02.010.06.015.08.047.048.0195.018.02.02.023.00.0
1015.05.055.07.019.020.010.013.0117.060.0119.028.03.01.019.05.0
1159.05.060.030.059.06.08.013.0113.024.035.031.016.011.020.06.0
1256.020.0163.08.06.017.019.04.031.013.057.022.011.011.056.02.0
137.01.082.014.017.01.011.032.056.07.0158.074.05.00.021.010.0
1415.00.070.00.06.00.02.01.075.04.0193.00.015.00.0113.02.0
152.00.0107.02.00.00.03.01.05.05.0364.04.00.00.01.02.0
161.01.02.03.01.00.03.01.010.00.0460.05.00.00.06.03.0
179.03.00.00.01.00.00.00.0272.0157.01.041.06.04.01.01.0
1814.00.0269.05.03.01.0155.05.00.00.02.00.00.00.039.03.0
192.00.012.03.00.01.00.00.01.02.0438.024.00.03.010.00.0
201.00.01.01.03.01.02.00.0224.01.0226.09.02.01.024.00.0
212.02.0220.06.00.00.01.02.027.010.0207.09.00.03.06.01.0
228.016.03.02.03.06.02.04.0119.0229.038.048.04.06.00.08.0
2347.013.062.012.0115.030.030.082.026.07.05.05.016.012.016.018.0
2438.032.0119.015.020.015.017.010.042.09.052.010.017.021.066.013.0
2517.012.077.011.026.023.013.015.037.048.0143.026.06.07.028.07.0
2613.015.048.010.030.015.020.025.078.030.0118.035.010.013.032.04.0
PWM
AAACAGATCACCCGCTGAGCGGGTTATCTGTT
01-0.252-1.5920.779-1.014-0.384-0.78-0.431-0.4310.493-0.4821.3110.391-1.014-1.2070.091-0.174
02-0.431-1.2070.876-2.226-1.014-0.852-0.78-1.1061.142-0.5351.112-0.136-1.014-0.8520.671-0.535
03-0.535-1.2071.202-1.207-0.78-1.014-1.32-0.4310.347-0.2121.606-0.431-1.32-1.320.062-1.207
04-0.713-1.320.654-3.119-0.852-1.014-1.207-0.4310.347-0.2521.962-1.106-1.968-1.1060.148-1.32
05-0.252-0.780.148-2.576-0.252-1.32-0.78-1.4471.4690.1751.393-0.066-1.592-1.762-0.294-1.762
060.148-0.651.401-1.014-0.136-1.968-0.384-0.930.4120.2011.112-0.482-1.762-2.226-0.032-1.762
07-0.482-0.780.822-1.014-0.78-1.2070.0-1.4470.6210.01.662-0.482-1.32-2.576-0.066-1.32
08-1.106-1.7620.928-1.762-0.294-1.762-0.252-1.9681.012-0.1741.692-0.78-2.226-2.2260.12-1.968
09-0.294-1.5921.069-2.576-1.106-1.592-0.713-1.320.4120.4331.829-0.535-2.576-2.576-0.294-4.393
10-0.713-1.7620.568-1.447-0.482-0.431-1.106-0.8521.3190.6541.336-0.1-2.226-3.119-0.482-1.762
110.638-1.7620.654-0.0320.638-1.592-1.32-0.8521.284-0.2520.120.0-0.65-1.014-0.431-1.592
120.586-0.4311.65-1.32-1.592-0.591-0.482-1.9680.0-0.8520.603-0.338-1.014-1.0140.586-2.576
13-1.447-3.1190.965-0.78-0.591-3.119-1.0140.0310.586-1.4471.6190.863-1.762-4.393-0.384-1.106
14-0.713-4.3930.808-4.393-1.592-4.393-2.576-3.1190.876-1.9681.818-4.393-0.713-4.3931.284-2.576
15-2.576-4.3931.23-2.576-4.393-4.393-2.226-3.119-1.762-1.7622.452-1.968-4.393-4.393-3.119-2.576
16-3.119-3.119-2.576-2.226-3.119-4.393-2.226-3.119-1.106-4.3932.686-1.762-4.393-4.393-1.592-2.226
17-1.207-2.226-4.393-4.393-3.119-4.393-4.393-4.3932.1611.612-3.1190.277-1.592-1.968-3.119-3.119
18-0.78-4.3932.15-1.762-2.226-3.1191.6-1.762-4.393-4.393-2.576-4.393-4.393-4.3930.227-2.226
19-2.576-4.393-0.93-2.226-4.393-3.119-4.393-4.393-3.119-2.5762.637-0.252-4.393-2.226-1.106-4.393
20-3.119-4.393-3.119-3.119-2.226-3.119-2.576-4.3931.967-3.1191.976-1.207-2.576-3.119-0.252-4.393
21-2.576-2.5761.949-1.592-4.393-4.393-3.119-2.576-0.136-1.1061.888-1.207-4.393-2.226-1.592-3.119
22-1.32-0.65-2.226-2.576-2.226-1.592-2.576-1.9681.3361.9890.2010.433-1.968-1.592-4.393-1.32
230.412-0.8520.687-0.931.302-0.032-0.0320.965-0.174-1.447-1.762-1.762-0.65-0.93-0.65-0.535
240.2010.0311.336-0.713-0.431-0.713-0.591-1.1060.3-1.2070.512-1.106-0.591-0.3840.749-0.852
25-0.591-0.930.902-1.014-0.174-0.294-0.852-0.7130.1750.4331.519-0.174-1.592-1.447-0.1-1.447
26-0.852-0.7130.433-1.106-0.032-0.713-0.431-0.2120.915-0.0321.3280.12-1.106-0.8520.031-1.968