We, Russian scientists of the autosome team, are depressed by the dire events caused by Russian military actions in Ukraine.
We express our condolences to all affected people and sincerely hope for a prompt transition to peace.
Model info
Transcription factorSp7
ModelSP7_MOUSE.H11DI.0.A
Model typeDinucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceChIP-Seq
Model releaseHOCOMOCOv11
Model length16
Quality
A
Motif rank
0
ConsensusvhRvSMWvYMATTWnn
Best auROC (human)
Best auROC (mouse)0.979
Peak sets in benchmark (human)
Peak sets in benchmark (mouse)19
Aligned words410
TF familyThree-zinc finger Kr├╝ppel-related factors {2.3.1}
TF subfamilySp1-like factors {2.3.1.1}
MGIMGI:2153568
EntrezGeneGeneID:170574
(SSTAR profile)
UniProt IDSP7_MOUSE
UniProt ACQ8VI67
(TFClass)
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 10.422460000000001
0.0005 12.080960000000001
0.0001 15.503510000000002
GTEx tissue expression atlas Sp7 expression
Motifs in JASPAR
PCM
AAACAGATCACCCGCTGAGCGGGTTATCTGTT
0162.028.021.036.080.020.02.032.047.016.06.022.013.09.08.08.0
02154.04.030.014.061.05.04.03.026.02.09.00.076.04.08.010.0
03114.0115.070.018.04.07.00.04.012.016.018.05.09.011.01.06.0
047.0111.016.05.020.0113.00.016.08.049.027.05.09.014.08.02.0
054.035.00.05.041.0219.05.022.01.031.010.09.06.019.02.01.0
063.04.01.044.037.045.07.0215.00.00.01.016.017.00.09.011.0
0713.09.032.03.024.011.06.08.03.07.08.00.0111.017.0149.09.0
085.021.06.0119.00.012.01.031.06.034.02.0153.01.010.03.06.0
099.02.01.00.063.06.00.08.05.06.00.01.0192.049.032.036.0
10237.09.00.023.060.01.01.01.022.00.02.09.042.01.00.02.0
111.02.05.0353.00.01.00.010.00.00.00.03.01.01.02.031.0
120.00.00.02.01.01.00.02.00.02.00.05.04.043.06.0344.0
135.00.00.00.035.01.00.010.05.00.00.01.0223.08.07.0115.0
1460.052.052.0104.03.02.01.03.04.02.01.00.021.025.029.051.0
1533.018.027.010.038.021.06.016.016.020.016.031.024.056.057.021.0
PWM
AAACAGATCACCCGCTGAGCGGGTTATCTGTT
010.8750.087-0.1960.3361.129-0.244-2.3930.2190.6-0.462-1.406-0.15-0.665-1.02-1.133-1.133
021.781-1.7820.156-0.5930.859-1.576-1.782-2.0410.014-2.393-1.02-4.2361.078-1.782-1.133-0.919
031.4811.490.996-0.347-1.782-1.26-4.236-1.782-0.742-0.462-0.347-1.576-1.02-0.827-2.939-1.406
04-1.261.455-0.462-1.576-0.2441.473-4.236-0.462-1.1330.6410.052-1.576-1.02-0.593-1.133-2.393
05-1.7820.308-4.236-1.5760.4652.133-1.576-0.15-2.9390.188-0.919-1.02-1.406-0.294-2.393-2.939
06-2.041-1.782-2.9390.5350.3630.557-1.262.114-4.236-4.236-2.939-0.462-0.403-4.236-1.02-0.827
07-0.665-1.020.219-2.041-0.065-0.827-1.406-1.133-2.041-1.26-1.133-4.2361.455-0.4031.748-1.02
08-1.576-0.196-1.4061.524-4.236-0.742-2.9390.188-1.4060.279-2.3931.775-2.939-0.919-2.041-1.406
09-1.02-2.393-2.939-4.2360.891-1.406-4.236-1.133-1.576-1.406-4.236-2.9392.0010.6410.2190.336
102.212-1.02-4.236-0.1060.842-2.939-2.939-2.939-0.15-4.236-2.393-1.020.488-2.939-4.236-2.393
11-2.939-2.393-1.5762.609-4.236-2.939-4.236-0.919-4.236-4.236-4.236-2.041-2.939-2.939-2.3930.188
12-4.236-4.236-4.236-2.393-2.939-2.939-4.236-2.393-4.236-2.393-4.236-1.576-1.7820.512-1.4062.584
13-1.576-4.236-4.236-4.2360.308-2.939-4.236-0.919-1.576-4.236-4.236-2.9392.151-1.133-1.261.49
140.8420.70.71.39-2.041-2.393-2.939-2.041-1.782-2.393-2.939-4.236-0.196-0.0240.1220.681
150.25-0.3470.052-0.9190.389-0.196-1.406-0.462-0.462-0.244-0.4620.188-0.0650.7740.791-0.196