We, Russian scientists of the autosome team, are depressed by the dire events caused by Russian military actions in Ukraine.
We express our condolences to all affected people and sincerely hope for a prompt transition to peace.
Model info
Transcription factorSpi1
ModelSPI1_MOUSE.H11DI.0.A
Model typeDinucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceChIP-Seq
Model releaseHOCOMOCOv11
Model length18
Quality
A
Motif rank
0
ConsensusnvvRRWGRGGAAGTGvnv
Best auROC (human)0.999
Best auROC (mouse)0.999
Peak sets in benchmark (human)80
Peak sets in benchmark (mouse)204
Aligned words505
TF familyEts-related factors {3.5.2}
TF subfamilySpi-like factors {3.5.2.5}
MGIMGI:98282
EntrezGeneGeneID:20375
(SSTAR profile)
UniProt IDSPI1_MOUSE
UniProt ACP17433
(TFClass)
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 5.11311
0.0005 7.910360000000001
0.0001 13.76831
GTEx tissue expression atlas Spi1 expression
Motifs in JASPAR
MA0080.1 (SPI1; Homo sapiens)
MA0080.2 (SPI1; Homo sapiens)
MA0080.3 (Spi1; Mus musculus)
MA0080.4 (SPI1; Homo sapiens)
PCM
AAACAGATCACCCGCTGAGCGGGTTATCTGTT
0148.020.050.09.082.035.017.025.063.017.033.017.026.014.026.017.0
0280.019.0116.04.049.019.09.09.069.07.045.05.022.012.025.09.0
03166.07.039.08.035.05.05.012.0152.05.026.012.016.03.02.06.0
04301.04.052.012.09.04.05.02.043.011.016.02.013.01.016.08.0
05287.04.021.054.012.00.01.07.046.02.030.011.02.00.05.017.0
0643.024.0274.06.06.00.00.00.09.06.042.00.013.01.075.00.0
0728.04.039.00.031.00.00.00.0284.034.072.01.01.00.05.00.0
086.00.0338.00.019.00.019.00.09.00.0107.00.00.00.01.00.0
091.00.033.00.00.00.00.00.00.00.0465.00.00.00.00.00.0
101.00.00.00.00.00.00.00.0498.00.00.00.00.00.00.00.0
11499.00.00.00.00.00.00.00.00.00.00.00.00.00.00.00.0
1214.079.0405.01.00.00.00.00.00.00.00.00.00.00.00.00.0
130.00.00.014.08.05.00.066.010.021.04.0370.00.00.00.01.0
140.02.016.00.02.014.010.00.00.01.03.00.06.027.0418.00.0
153.00.05.00.016.014.04.010.0178.097.0149.023.00.00.00.00.0
16105.019.062.011.028.026.018.039.033.043.056.026.03.010.017.03.0
17112.021.031.05.035.028.06.029.044.047.042.020.07.016.034.022.0
PWM
AAACAGATCACCCGCTGAGCGGGTTATCTGTT
010.427-0.4370.467-1.2130.9590.114-0.597-0.2180.697-0.5970.056-0.597-0.179-0.786-0.179-0.597
020.934-0.4881.305-1.9730.447-0.488-1.213-1.2130.787-1.4520.363-1.768-0.344-0.936-0.218-1.213
031.662-1.4520.221-1.3260.114-1.768-1.768-0.9361.574-1.768-0.179-0.936-0.656-2.232-2.582-1.598
042.256-1.9730.506-0.936-1.213-1.973-1.768-2.5820.318-1.02-0.656-2.582-0.858-3.124-0.656-1.326
052.208-1.973-0.390.544-0.936-4.398-3.124-1.4520.385-2.582-0.038-1.02-2.582-4.398-1.768-0.597
060.318-0.2582.162-1.598-1.598-4.398-4.398-4.398-1.213-1.5980.294-4.398-0.858-3.1240.87-4.398
07-0.106-1.9730.221-4.398-0.006-4.398-4.398-4.3982.1980.0850.83-3.124-3.124-4.398-1.768-4.398
08-1.598-4.3982.372-4.398-0.488-4.398-0.488-4.398-1.213-4.3981.224-4.398-4.398-4.398-3.124-4.398
09-3.124-4.3980.056-4.398-4.398-4.398-4.398-4.398-4.398-4.3982.69-4.398-4.398-4.398-4.398-4.398
10-3.124-4.398-4.398-4.398-4.398-4.398-4.398-4.3982.759-4.398-4.398-4.398-4.398-4.398-4.398-4.398
112.761-4.398-4.398-4.398-4.398-4.398-4.398-4.398-4.398-4.398-4.398-4.398-4.398-4.398-4.398-4.398
12-0.7860.9222.552-3.124-4.398-4.398-4.398-4.398-4.398-4.398-4.398-4.398-4.398-4.398-4.398-4.398
13-4.398-4.398-4.398-0.786-1.326-1.768-4.3980.743-1.112-0.39-1.9732.462-4.398-4.398-4.398-3.124
14-4.398-2.582-0.656-4.398-2.582-0.786-1.112-4.398-4.398-3.124-2.232-4.398-1.598-0.1422.584-4.398
15-2.232-4.398-1.768-4.398-0.656-0.786-1.973-1.1121.7321.1261.554-0.3-4.398-4.398-4.398-4.398
161.205-0.4880.681-1.02-0.106-0.179-0.5410.2210.0560.3180.58-0.179-2.232-1.112-0.597-2.232
171.27-0.39-0.006-1.7680.114-0.106-1.598-0.0720.3410.4060.294-0.437-1.452-0.6560.085-0.344