We, Russian scientists of the autosome team, are depressed by the dire events caused by Russian military actions in Ukraine.
We express our condolences to all affected people and sincerely hope for a prompt transition to peace.
Model info
Transcription factorSPIB
(GeneCards)
ModelSPIB_HUMAN.H11DI.0.A
Model typeDinucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceChIP-Seq
Model releaseHOCOMOCOv11
Model length19
Quality
A
Motif rank
0
ConsensusvvRRWRRGGAASTGRdRvn
Best auROC (human)0.999
Best auROC (mouse)0.961
Peak sets in benchmark (human)12
Peak sets in benchmark (mouse)3
Aligned words413
TF familyEts-related factors {3.5.2}
TF subfamilySpi-like factors {3.5.2.5}
HGNCHGNC:11242
EntrezGeneGeneID:6689
(SSTAR profile)
UniProt IDSPIB_HUMAN
UniProt ACQ01892
(TFClass)
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 6.615710000000001
0.0005 9.01806
0.0001 14.15251
GTEx tissue expression atlas SPIB expression
ReMap ChIP-seq dataset list SPIB datasets
Motifs in JASPAR
PCM
AAACAGATCACCCGCTGAGCGGGTTATCTGTT
0161.015.070.016.054.013.04.012.056.014.039.06.015.06.024.07.0
02145.00.029.012.033.07.02.06.0104.07.014.012.014.03.012.012.0
03247.06.037.06.09.03.01.04.026.07.024.00.011.02.012.017.0
04223.08.022.040.015.01.00.02.039.09.019.07.01.02.03.021.0
0546.012.0218.02.016.03.01.00.010.02.030.02.07.02.060.01.0
0635.00.043.01.012.01.06.00.0208.026.073.02.02.00.02.01.0
0711.00.0246.00.012.00.014.01.012.00.0112.00.01.00.03.00.0
082.01.033.00.00.00.00.00.06.01.0367.01.00.00.01.00.0
096.01.01.00.02.00.00.00.0392.08.01.00.00.00.01.00.0
10392.01.03.04.07.00.01.01.03.00.00.00.00.00.00.00.0
1118.080.0300.04.00.01.00.00.00.02.02.00.00.01.04.00.0
123.01.00.014.010.01.00.073.07.07.02.0290.01.01.01.01.0
132.00.019.00.01.00.09.00.00.00.03.00.02.07.0367.02.0
143.00.02.00.02.01.02.02.0263.030.089.016.00.00.02.00.0
15175.015.070.08.012.03.04.012.016.016.041.022.01.05.09.03.0
16160.010.018.016.015.06.01.017.069.015.025.015.08.010.018.09.0
1740.092.0101.019.013.014.04.010.09.021.022.010.05.015.024.013.0
1818.013.027.09.028.056.09.049.034.042.032.043.011.09.014.018.0
PWM
AAACAGATCACCCGCTGAGCGGGTTATCTGTT
010.854-0.530.991-0.4670.733-0.669-1.787-0.7470.769-0.5970.41-1.41-0.53-1.41-0.069-1.265
021.716-4.240.117-0.7470.245-1.265-2.397-1.411.385-1.265-0.597-0.747-0.597-2.046-0.747-0.747
032.248-1.410.358-1.41-1.025-2.046-2.944-1.7870.01-1.265-0.069-4.24-0.831-2.397-0.747-0.408
042.146-1.138-0.1550.435-0.53-2.944-4.24-2.3970.41-1.025-0.299-1.265-2.944-2.397-2.046-0.201
050.574-0.7472.123-2.397-0.467-2.046-2.944-4.24-0.923-2.3970.151-2.397-1.265-2.3970.838-2.944
060.303-4.240.507-2.944-0.747-2.944-1.41-4.242.0760.011.033-2.397-2.397-4.24-2.397-2.944
07-0.831-4.242.244-4.24-0.747-4.24-0.597-2.944-0.747-4.241.459-4.24-2.944-4.24-2.046-4.24
08-2.397-2.9440.245-4.24-4.24-4.24-4.24-4.24-1.41-2.9442.643-2.944-4.24-4.24-2.944-4.24
09-1.41-2.944-2.944-4.24-2.397-4.24-4.24-4.242.709-1.138-2.944-4.24-4.24-4.24-2.944-4.24
102.709-2.944-2.046-1.787-1.265-4.24-2.944-2.944-2.046-4.24-4.24-4.24-4.24-4.24-4.24-4.24
11-0.3521.1242.442-1.787-4.24-2.944-4.24-4.24-4.24-2.397-2.397-4.24-4.24-2.944-1.787-4.24
12-2.046-2.944-4.24-0.597-0.923-2.944-4.241.033-1.265-1.265-2.3972.408-2.944-2.944-2.944-2.944
13-2.397-4.24-0.299-4.24-2.944-4.24-1.025-4.24-4.24-4.24-2.046-4.24-2.397-1.2652.643-2.397
14-2.046-4.24-2.397-4.24-2.397-2.944-2.397-2.3972.3110.1511.23-0.467-4.24-4.24-2.397-4.24
151.904-0.530.991-1.138-0.747-2.046-1.787-0.747-0.467-0.4670.46-0.155-2.944-1.581-1.025-2.046
161.815-0.923-0.352-0.467-0.53-1.41-2.944-0.4080.977-0.53-0.029-0.53-1.138-0.923-0.352-1.025
170.4351.2631.356-0.299-0.669-0.597-1.787-0.923-1.025-0.201-0.155-0.923-1.581-0.53-0.069-0.669
18-0.352-0.6690.047-1.0250.0830.769-1.0250.6370.2740.4840.2140.507-0.831-1.025-0.597-0.352