We, Russian scientists of the autosome team, are depressed by the dire events caused by Russian military actions in Ukraine.
We express our condolences to all affected people and sincerely hope for a prompt transition to peace.
Model info
Transcription factorSpib
ModelSPIB_MOUSE.H11DI.0.A
Model typeDinucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceChIP-Seq
Model releaseHOCOMOCOv11
Model length19
Quality
A
Motif rank
0
ConsensusnvRRWRRGGAASTGRdRvn
Best auROC (human)0.999
Best auROC (mouse)0.983
Peak sets in benchmark (human)12
Peak sets in benchmark (mouse)3
Aligned words500
TF familyEts-related factors {3.5.2}
TF subfamilySpi-like factors {3.5.2.5}
MGIMGI:892986
EntrezGeneGeneID:272382
(SSTAR profile)
UniProt IDSPIB_MOUSE
UniProt ACO35906
(TFClass)
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 7.13476
0.0005 9.59966
0.0001 14.76881
GTEx tissue expression atlas Spib expression
Motifs in JASPAR
MA0081.1 (SPIB; Homo sapiens)
PCM
AAACAGATCACCCGCTGAGCGGGTTATCTGTT
0180.015.088.08.033.019.021.018.060.023.037.08.022.018.035.013.0
02139.06.032.018.041.08.07.019.0129.08.025.019.017.05.011.014.0
03257.012.042.015.016.03.03.05.038.013.017.07.019.07.018.026.0
04232.08.037.053.027.01.01.06.043.04.027.06.014.00.06.033.0
0551.018.0238.09.09.03.01.00.019.09.042.01.018.02.068.010.0
0642.07.047.01.026.01.05.00.0233.045.067.04.09.00.011.00.0
0711.01.0297.01.036.00.017.00.027.00.0103.00.00.01.04.00.0
081.00.072.01.00.00.02.00.00.05.0416.00.01.00.00.00.0
092.00.00.00.04.00.00.01.0488.01.01.00.01.00.00.00.0
10485.00.02.08.00.00.01.00.01.00.00.00.01.00.00.00.0
1136.083.0366.02.00.00.00.00.00.00.03.00.05.00.03.00.0
122.03.00.036.010.02.00.071.022.08.00.0342.00.01.00.01.0
132.02.030.00.01.03.09.01.00.00.00.00.04.019.0425.02.0
143.00.04.00.08.03.07.06.0318.048.077.021.01.00.02.00.0
15234.012.068.016.017.08.05.021.024.014.037.015.04.07.010.06.0
16227.011.027.014.011.013.05.012.063.017.026.014.013.019.016.010.0
1749.0135.0114.016.021.019.05.015.017.019.017.021.013.016.013.08.0
1824.022.039.015.032.071.013.073.036.032.026.055.08.020.021.011.0
PWM
AAACAGATCACCCGCTGAGCGGGTTATCTGTT
010.936-0.7171.031-1.3240.058-0.486-0.388-0.5390.65-0.2980.171-1.324-0.342-0.5390.116-0.856
021.487-1.5960.027-0.5390.273-1.324-1.451-0.4861.412-1.324-0.216-0.486-0.595-1.766-1.018-0.784
032.1-0.9340.296-0.717-0.654-2.23-2.23-1.7660.197-0.856-0.595-1.451-0.486-1.451-0.539-0.177
041.998-1.3240.1710.527-0.14-3.122-3.122-1.5960.32-1.971-0.14-1.596-0.784-4.397-1.5960.058
050.489-0.5392.023-1.211-1.211-2.23-3.122-4.397-0.486-1.2110.296-3.122-0.539-2.580.775-1.11
060.296-1.4510.408-3.122-0.177-3.122-1.766-4.3972.0020.3650.76-1.971-1.211-4.397-1.018-4.397
07-1.018-3.1222.245-3.1220.144-4.397-0.595-4.397-0.14-4.3971.188-4.397-4.397-3.122-1.971-4.397
08-3.122-4.3970.832-3.122-4.397-4.397-2.58-4.397-4.397-1.7662.581-4.397-3.122-4.397-4.397-4.397
09-2.58-4.397-4.397-4.397-1.971-4.397-4.397-3.1222.741-3.122-3.122-4.397-3.122-4.397-4.397-4.397
102.735-4.397-2.58-1.324-4.397-4.397-3.122-4.397-3.122-4.397-4.397-4.397-3.122-4.397-4.397-4.397
110.1440.9732.453-2.58-4.397-4.397-4.397-4.397-4.397-4.397-2.23-4.397-1.766-4.397-2.23-4.397
12-2.58-2.23-4.3970.144-1.11-2.58-4.3970.818-0.342-1.324-4.3972.386-4.397-3.122-4.397-3.122
13-2.58-2.58-0.036-4.397-3.122-2.23-1.211-3.122-4.397-4.397-4.397-4.397-1.971-0.4862.603-2.58
14-2.23-4.397-1.971-4.397-1.324-2.23-1.451-1.5962.3130.4290.898-0.388-3.122-4.397-2.58-4.397
152.007-0.9340.775-0.654-0.595-1.324-1.766-0.388-0.256-0.7840.171-0.717-1.971-1.451-1.11-1.596
161.976-1.018-0.14-0.784-1.018-0.856-1.766-0.9340.699-0.595-0.177-0.784-0.856-0.486-0.654-1.11
170.4491.4581.289-0.654-0.388-0.486-1.766-0.717-0.595-0.486-0.595-0.388-0.856-0.654-0.856-1.324
18-0.256-0.3420.223-0.7170.0270.818-0.8560.8450.1440.027-0.1770.564-1.324-0.435-0.388-1.018