Model info
| Transcription factor | STAT5A (GeneCards) | ||||||||
| Model | STA5A_HUMAN.H11MO.0.A | ||||||||
| Model type | Mononucleotide PWM | ||||||||
| LOGO |  | ||||||||
| LOGO (reverse complement) |  | ||||||||
| Data source | ChIP-Seq | ||||||||
| Model release | HOCOMOCOv11 | ||||||||
| Model length | 10 | ||||||||
| Quality | A | ||||||||
| Motif rank | 0 | ||||||||
| Consensus | TTCYARGAAd | ||||||||
| Best auROC (human) | 0.932 | ||||||||
| Best auROC (mouse) | 0.992 | ||||||||
| Peak sets in benchmark (human) | 24 | ||||||||
| Peak sets in benchmark (mouse) | 127 | ||||||||
| Aligned words | 500 | ||||||||
| TF family | STAT factors {6.2.1} | ||||||||
| TF subfamily | STAT5A {6.2.1.0.5} | ||||||||
| HGNC | HGNC:11366 | ||||||||
| EntrezGene | GeneID:6776 (SSTAR profile) | ||||||||
| UniProt ID | STA5A_HUMAN | ||||||||
| UniProt AC | P42229 (TFClass) | ||||||||
| Comment | |||||||||
| Downloads | pcm
pwm alignment threshold to P-value grid | ||||||||
| Standard thresholds |
| ||||||||
| GTEx tissue expression atlas | STAT5A expression | ||||||||
| ReMap ChIP-seq dataset list | STAT5A datasets | ||||||||
| Motifs in JASPAR |
PCM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 4.0 | 19.0 | 2.0 | 475.0 |
| 02 | 34.0 | 11.0 | 3.0 | 452.0 |
| 03 | 5.0 | 493.0 | 1.0 | 1.0 |
| 04 | 25.0 | 221.0 | 6.0 | 248.0 |
| 05 | 329.0 | 0.0 | 171.0 | 0.0 |
| 06 | 194.0 | 2.0 | 294.0 | 10.0 |
| 07 | 2.0 | 1.0 | 493.0 | 4.0 |
| 08 | 473.0 | 0.0 | 9.0 | 18.0 |
| 09 | 481.0 | 3.0 | 15.0 | 1.0 |
| 10 | 211.0 | 86.0 | 115.0 | 88.0 |
PWM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | -3.126 | -1.818 | -3.573 | 1.326 |
| 02 | -1.27 | -2.311 | -3.325 | 1.276 |
| 03 | -2.961 | 1.363 | -3.903 | -3.903 |
| 04 | -1.561 | 0.565 | -2.819 | 0.679 |
| 05 | 0.96 | -4.4 | 0.31 | -4.4 |
| 06 | 0.435 | -3.573 | 0.848 | -2.394 |
| 07 | -3.573 | -3.903 | 1.363 | -3.126 |
| 08 | 1.322 | -4.4 | -2.484 | -1.868 |
| 09 | 1.338 | -3.325 | -2.034 | -3.903 |
| 10 | 0.519 | -0.368 | -0.082 | -0.346 |