Model info
| Transcription factor | Stat5a | ||||||||
| Model | STA5A_MOUSE.H11MO.0.A | ||||||||
| Model type | Mononucleotide PWM | ||||||||
| LOGO |  | ||||||||
| LOGO (reverse complement) |  | ||||||||
| Data source | ChIP-Seq | ||||||||
| Model release | HOCOMOCOv11 | ||||||||
| Model length | 10 | ||||||||
| Quality | A | ||||||||
| Motif rank | 0 | ||||||||
| Consensus | TTCYARGAAv | ||||||||
| Best auROC (human) | 0.928 | ||||||||
| Best auROC (mouse) | 0.992 | ||||||||
| Peak sets in benchmark (human) | 24 | ||||||||
| Peak sets in benchmark (mouse) | 127 | ||||||||
| Aligned words | 500 | ||||||||
| TF family | STAT factors {6.2.1} | ||||||||
| TF subfamily | STAT5A {6.2.1.0.5} | ||||||||
| MGI | MGI:103036 | ||||||||
| EntrezGene | GeneID:20850 (SSTAR profile) | ||||||||
| UniProt ID | STA5A_MOUSE | ||||||||
| UniProt AC | P42230 (TFClass) | ||||||||
| Comment | |||||||||
| Downloads | pcm
pwm alignment threshold to P-value grid | ||||||||
| Standard thresholds |
| ||||||||
| GTEx tissue expression atlas | Stat5a expression | ||||||||
| Motifs in JASPAR |
PCM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 10.0 | 9.0 | 2.0 | 479.0 |
| 02 | 22.0 | 2.0 | 4.0 | 472.0 |
| 03 | 1.0 | 496.0 | 3.0 | 0.0 |
| 04 | 20.0 | 331.0 | 4.0 | 145.0 |
| 05 | 325.0 | 175.0 | 0.0 | 0.0 |
| 06 | 243.0 | 3.0 | 224.0 | 30.0 |
| 07 | 4.0 | 0.0 | 492.0 | 4.0 |
| 08 | 477.0 | 5.0 | 8.0 | 10.0 |
| 09 | 490.0 | 0.0 | 5.0 | 5.0 |
| 10 | 215.0 | 93.0 | 102.0 | 90.0 |
PWM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | -2.394 | -2.484 | -3.573 | 1.334 |
| 02 | -1.681 | -3.573 | -3.126 | 1.32 |
| 03 | -3.903 | 1.369 | -3.325 | -4.4 |
| 04 | -1.77 | 0.966 | -3.126 | 0.147 |
| 05 | 0.948 | 0.333 | -4.4 | -4.4 |
| 06 | 0.659 | -3.325 | 0.578 | -1.389 |
| 07 | -3.126 | -4.4 | 1.361 | -3.126 |
| 08 | 1.33 | -2.961 | -2.584 | -2.394 |
| 09 | 1.357 | -4.4 | -2.961 | -2.961 |
| 10 | 0.537 | -0.291 | -0.201 | -0.324 |