Transcription factor | Stat5a | ||||||||
Model | STA5A_MOUSE.H11MO.0.A | ||||||||
Model type | Mononucleotide PWM | ||||||||
LOGO | |||||||||
LOGO (reverse complement) | |||||||||
Data source | ChIP-Seq | ||||||||
Model release | HOCOMOCOv11 | ||||||||
Model length | 10 | ||||||||
Quality | A | ||||||||
Motif rank | 0 | ||||||||
Consensus | TTCYARGAAv | ||||||||
Best auROC (human) | 0.928 | ||||||||
Best auROC (mouse) | 0.992 | ||||||||
Peak sets in benchmark (human) | 24 | ||||||||
Peak sets in benchmark (mouse) | 127 | ||||||||
Aligned words | 500 | ||||||||
TF family | STAT factors {6.2.1} | ||||||||
TF subfamily | STAT5A {6.2.1.0.5} | ||||||||
MGI | MGI:103036 | ||||||||
EntrezGene | GeneID:20850 (SSTAR profile) | ||||||||
UniProt ID | STA5A_MOUSE | ||||||||
UniProt AC | P42230 (TFClass) | ||||||||
Comment | |||||||||
Downloads | pcm
pwm alignment threshold to P-value grid | ||||||||
Standard thresholds |
| ||||||||
GTEx tissue expression atlas | Stat5a expression | ||||||||
Motifs in JASPAR |
A | C | G | T | |
---|---|---|---|---|
01 | 10.0 | 9.0 | 2.0 | 479.0 |
02 | 22.0 | 2.0 | 4.0 | 472.0 |
03 | 1.0 | 496.0 | 3.0 | 0.0 |
04 | 20.0 | 331.0 | 4.0 | 145.0 |
05 | 325.0 | 175.0 | 0.0 | 0.0 |
06 | 243.0 | 3.0 | 224.0 | 30.0 |
07 | 4.0 | 0.0 | 492.0 | 4.0 |
08 | 477.0 | 5.0 | 8.0 | 10.0 |
09 | 490.0 | 0.0 | 5.0 | 5.0 |
10 | 215.0 | 93.0 | 102.0 | 90.0 |
A | C | G | T | |
---|---|---|---|---|
01 | -2.394 | -2.484 | -3.573 | 1.334 |
02 | -1.681 | -3.573 | -3.126 | 1.32 |
03 | -3.903 | 1.369 | -3.325 | -4.4 |
04 | -1.77 | 0.966 | -3.126 | 0.147 |
05 | 0.948 | 0.333 | -4.4 | -4.4 |
06 | 0.659 | -3.325 | 0.578 | -1.389 |
07 | -3.126 | -4.4 | 1.361 | -3.126 |
08 | 1.33 | -2.961 | -2.584 | -2.394 |
09 | 1.357 | -4.4 | -2.961 | -2.961 |
10 | 0.537 | -0.291 | -0.201 | -0.324 |