We, Russian scientists of the autosome team, are depressed by the dire events caused by Russian military actions in Ukraine.
We express our condolences to all affected people and sincerely hope for a prompt transition to peace.
Model info
Transcription factorStat5a
ModelSTA5A_MOUSE.H11MO.0.A
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceChIP-Seq
Model releaseHOCOMOCOv11
Model length10
Quality
A
Motif rank
0
ConsensusTTCYARGAAv
Best auROC (human)0.928
Best auROC (mouse)0.992
Peak sets in benchmark (human)24
Peak sets in benchmark (mouse)127
Aligned words500
TF familySTAT factors {6.2.1}
TF subfamilySTAT5A {6.2.1.0.5}
MGIMGI:103036
EntrezGeneGeneID:20850
(SSTAR profile)
UniProt IDSTA5A_MOUSE
UniProt ACP42230
(TFClass)
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 4.695085
0.0005 5.83328
0.0001 7.82138
GTEx tissue expression atlas Stat5a expression
Motifs in JASPAR
MA0519.1 (Stat5a::Stat5b; Mus musculus)
PCM
ACGT
0110.09.02.0479.0
0222.02.04.0472.0
031.0496.03.00.0
0420.0331.04.0145.0
05325.0175.00.00.0
06243.03.0224.030.0
074.00.0492.04.0
08477.05.08.010.0
09490.00.05.05.0
10215.093.0102.090.0
PWM
ACGT
01-2.394-2.484-3.5731.334
02-1.681-3.573-3.1261.32
03-3.9031.369-3.325-4.4
04-1.770.966-3.1260.147
050.9480.333-4.4-4.4
060.659-3.3250.578-1.389
07-3.126-4.41.361-3.126
081.33-2.961-2.584-2.394
091.357-4.4-2.961-2.961
100.537-0.291-0.201-0.324