We, Russian scientists of the autosome team, are depressed by the dire events caused by Russian military actions in Ukraine.
We express our condolences to all affected people and sincerely hope for a prompt transition to peace.
Model info
Transcription factorSTAT5B
(GeneCards)
ModelSTA5B_HUMAN.H11DI.0.A
Model typeDinucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceChIP-Seq
Model releaseHOCOMOCOv11
Model length12
Quality
A
Motif rank
0
ConsensusdhTTCYTRGAAn
Best auROC (human)0.963
Best auROC (mouse)0.963
Peak sets in benchmark (human)16
Peak sets in benchmark (mouse)31
Aligned words508
TF familySTAT factors {6.2.1}
TF subfamilySTAT5B {6.2.1.0.6}
HGNCHGNC:11367
EntrezGeneGeneID:6777
(SSTAR profile)
UniProt IDSTA5B_HUMAN
UniProt ACP51692
(TFClass)
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 9.666575
0.0005 11.8248
0.0001 17.047829999999998
GTEx tissue expression atlas STAT5B expression
ReMap ChIP-seq dataset list STAT5B datasets
Motifs in JASPAR
PCM
AAACAGATCACCCGCTGAGCGGGTTATCTGTT
0132.038.039.076.09.013.04.040.040.028.019.036.014.019.027.066.0
021.01.01.092.01.00.01.096.00.04.01.084.03.01.03.0211.0
031.00.00.04.00.00.00.06.02.00.00.04.042.09.02.0430.0
041.043.01.00.00.08.00.01.01.01.00.00.013.0428.03.00.0
051.08.01.05.039.0127.07.0307.00.02.00.02.00.01.00.00.0
060.024.00.016.00.040.00.098.00.06.00.02.00.0172.00.0142.0
070.00.00.00.0174.06.025.037.00.00.00.00.0113.00.0123.022.0
080.00.0284.03.00.00.06.00.00.00.0140.08.00.00.059.00.0
090.00.00.00.00.00.00.00.0426.01.05.057.08.00.00.03.0
10412.05.014.03.01.00.00.00.04.01.00.00.057.00.03.00.0
11179.076.096.0123.01.00.03.02.03.05.03.06.00.01.02.00.0
PWM
AAACAGATCACCCGCTGAGCGGGTTATCTGTT
010.0230.1930.2190.881-1.215-0.86-1.9750.2440.244-0.108-0.490.14-0.788-0.49-0.1440.741
02-3.126-3.126-3.1261.072-3.126-4.4-3.1261.114-4.4-1.975-3.1260.981-2.234-3.126-2.2341.899
03-3.126-4.4-4.4-1.975-4.4-4.4-4.4-1.6-2.584-4.4-4.4-1.9750.293-1.215-2.5842.61
04-3.1260.316-3.126-4.4-4.4-1.328-4.4-3.126-3.126-3.126-4.4-4.4-0.862.606-2.234-4.4
05-3.126-1.328-3.126-1.770.2191.393-1.4542.274-4.4-2.584-4.4-2.584-4.4-3.126-4.4-4.4
06-4.4-0.26-4.4-0.658-4.40.244-4.41.135-4.4-1.6-4.4-2.584-4.41.695-4.41.504
07-4.4-4.4-4.4-4.41.707-1.6-0.220.167-4.4-4.4-4.4-4.41.276-4.41.361-0.346
08-4.4-4.42.196-2.234-4.4-4.4-1.6-4.4-4.4-4.41.49-1.328-4.4-4.40.63-4.4
09-4.4-4.4-4.4-4.4-4.4-4.4-4.4-4.42.601-3.126-1.770.595-1.328-4.4-4.4-2.234
102.568-1.77-0.788-2.234-3.126-4.4-4.4-4.4-1.975-3.126-4.4-4.40.595-4.4-2.234-4.4
111.7350.8811.1141.361-3.126-4.4-2.234-2.584-2.234-1.77-2.234-1.6-4.4-3.126-2.584-4.4