We, Russian scientists of the autosome team, are depressed by the dire events caused by Russian military actions in Ukraine.
We express our condolences to all affected people and sincerely hope for a prompt transition to peace.
Model info
Transcription factorSTAT5B
(GeneCards)
ModelSTA5B_HUMAN.H11MO.0.A
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceChIP-Seq
Model releaseHOCOMOCOv11
Model length12
Quality
A
Motif rank
0
ConsensusnTTCYTRGAAdh
Best auROC (human)0.965
Best auROC (mouse)0.957
Peak sets in benchmark (human)16
Peak sets in benchmark (mouse)31
Aligned words501
TF familySTAT factors {6.2.1}
TF subfamilySTAT5B {6.2.1.0.6}
HGNCHGNC:11367
EntrezGeneGeneID:6777
(SSTAR profile)
UniProt IDSTA5B_HUMAN
UniProt ACP51692
(TFClass)
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 5.418139999999999
0.0005 6.367195000000001
0.0001 8.432185
GTEx tissue expression atlas STAT5B expression
ReMap ChIP-seq dataset list STAT5B datasets
Motifs in JASPAR
MA0519.1 (Stat5a::Stat5b; Mus musculus)
PCM
ACGT
0178.0119.078.0225.0
024.013.04.0479.0
0329.08.06.0457.0
045.0478.03.014.0
0538.0158.07.0297.0
060.00.0212.0288.0
07235.09.0206.050.0
0810.02.0469.019.0
09425.017.010.048.0
10485.01.013.01.0
11223.073.097.0107.0
1295.0127.070.0208.0
PWM
ACGT
01-0.464-0.049-0.4640.582
02-3.126-2.163-3.1261.334
03-1.421-2.584-2.8191.287
04-2.9611.332-3.325-2.096
05-1.1630.232-2.6940.858
06-4.4-4.40.5230.828
070.626-2.4840.495-0.898
08-2.394-3.5731.313-1.818
091.215-1.92-2.394-0.938
101.347-3.903-2.163-3.903
110.573-0.529-0.25-0.153
12-0.2710.016-0.570.504