Model info
| Transcription factor | Stat5b | ||||||||
| Model | STA5B_MOUSE.H11MO.0.A | ||||||||
| Model type | Mononucleotide PWM | ||||||||
| LOGO |  | ||||||||
| LOGO (reverse complement) |  | ||||||||
| Data source | ChIP-Seq | ||||||||
| Model release | HOCOMOCOv11 | ||||||||
| Model length | 12 | ||||||||
| Quality | A | ||||||||
| Motif rank | 0 | ||||||||
| Consensus | nTTCYTRGAAdh | ||||||||
| Best auROC (human) | 0.965 | ||||||||
| Best auROC (mouse) | 0.957 | ||||||||
| Peak sets in benchmark (human) | 16 | ||||||||
| Peak sets in benchmark (mouse) | 31 | ||||||||
| Aligned words | 501 | ||||||||
| TF family | STAT factors {6.2.1} | ||||||||
| TF subfamily | STAT5B {6.2.1.0.6} | ||||||||
| MGI | MGI:103035 | ||||||||
| EntrezGene | GeneID:20851 (SSTAR profile) | ||||||||
| UniProt ID | STA5B_MOUSE | ||||||||
| UniProt AC | P42232 (TFClass) | ||||||||
| Comment | |||||||||
| Downloads | pcm
pwm alignment threshold to P-value grid | ||||||||
| Standard thresholds |
| ||||||||
| GTEx tissue expression atlas | Stat5b expression | ||||||||
| Motifs in JASPAR |
PCM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 78.0 | 119.0 | 78.0 | 225.0 |
| 02 | 4.0 | 13.0 | 4.0 | 479.0 |
| 03 | 29.0 | 8.0 | 6.0 | 457.0 |
| 04 | 5.0 | 478.0 | 3.0 | 14.0 |
| 05 | 38.0 | 158.0 | 7.0 | 297.0 |
| 06 | 0.0 | 0.0 | 212.0 | 288.0 |
| 07 | 235.0 | 9.0 | 206.0 | 50.0 |
| 08 | 10.0 | 2.0 | 469.0 | 19.0 |
| 09 | 425.0 | 17.0 | 10.0 | 48.0 |
| 10 | 485.0 | 1.0 | 13.0 | 1.0 |
| 11 | 223.0 | 73.0 | 97.0 | 107.0 |
| 12 | 95.0 | 127.0 | 70.0 | 208.0 |
PWM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | -0.464 | -0.049 | -0.464 | 0.582 |
| 02 | -3.126 | -2.163 | -3.126 | 1.334 |
| 03 | -1.421 | -2.584 | -2.819 | 1.287 |
| 04 | -2.961 | 1.332 | -3.325 | -2.096 |
| 05 | -1.163 | 0.232 | -2.694 | 0.858 |
| 06 | -4.4 | -4.4 | 0.523 | 0.828 |
| 07 | 0.626 | -2.484 | 0.495 | -0.898 |
| 08 | -2.394 | -3.573 | 1.313 | -1.818 |
| 09 | 1.215 | -1.92 | -2.394 | -0.938 |
| 10 | 1.347 | -3.903 | -2.163 | -3.903 |
| 11 | 0.573 | -0.529 | -0.25 | -0.153 |
| 12 | -0.271 | 0.016 | -0.57 | 0.504 |