Model info
| Transcription factor | STAT1 (GeneCards) | ||||||||
| Model | STAT1_HUMAN.H11MO.1.A | ||||||||
| Model type | Mononucleotide PWM | ||||||||
| LOGO |  | ||||||||
| LOGO (reverse complement) |  | ||||||||
| Data source | ChIP-Seq | ||||||||
| Model release | HOCOMOCOv11 | ||||||||
| Model length | 19 | ||||||||
| Quality | A | ||||||||
| Motif rank | 1 | ||||||||
| Consensus | vRRRAAhnGAAAShdRRdn | ||||||||
| Best auROC (human) | 0.992 | ||||||||
| Best auROC (mouse) | 0.962 | ||||||||
| Peak sets in benchmark (human) | 37 | ||||||||
| Peak sets in benchmark (mouse) | 128 | ||||||||
| Aligned words | 500 | ||||||||
| TF family | STAT factors {6.2.1} | ||||||||
| TF subfamily | STAT1 {6.2.1.0.1} | ||||||||
| HGNC | HGNC:11362 | ||||||||
| EntrezGene | GeneID:6772 (SSTAR profile) | ||||||||
| UniProt ID | STAT1_HUMAN | ||||||||
| UniProt AC | P42224 (TFClass) | ||||||||
| Comment | |||||||||
| Downloads | pcm
pwm alignment threshold to P-value grid | ||||||||
| Standard thresholds |
| ||||||||
| GTEx tissue expression atlas | STAT1 expression | ||||||||
| ReMap ChIP-seq dataset list | STAT1 datasets | ||||||||
| Motifs in JASPAR |
PCM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 198.0 | 77.0 | 151.0 | 74.0 |
| 02 | 218.0 | 46.0 | 216.0 | 20.0 |
| 03 | 158.0 | 9.0 | 312.0 | 21.0 |
| 04 | 325.0 | 7.0 | 160.0 | 8.0 |
| 05 | 475.0 | 9.0 | 13.0 | 3.0 |
| 06 | 434.0 | 26.0 | 36.0 | 4.0 |
| 07 | 235.0 | 108.0 | 66.0 | 91.0 |
| 08 | 141.0 | 76.0 | 99.0 | 184.0 |
| 09 | 56.0 | 7.0 | 428.0 | 9.0 |
| 10 | 461.0 | 6.0 | 31.0 | 2.0 |
| 11 | 463.0 | 6.0 | 29.0 | 2.0 |
| 12 | 473.0 | 12.0 | 10.0 | 5.0 |
| 13 | 39.0 | 270.0 | 171.0 | 20.0 |
| 14 | 97.0 | 97.0 | 20.0 | 286.0 |
| 15 | 123.0 | 51.0 | 244.0 | 82.0 |
| 16 | 351.0 | 40.0 | 63.0 | 46.0 |
| 17 | 309.0 | 58.0 | 87.0 | 46.0 |
| 18 | 286.0 | 56.0 | 89.0 | 69.0 |
| 19 | 94.0 | 149.0 | 180.0 | 77.0 |
PWM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 0.455 | -0.477 | 0.187 | -0.516 |
| 02 | 0.551 | -0.979 | 0.542 | -1.77 |
| 03 | 0.232 | -2.484 | 0.907 | -1.725 |
| 04 | 0.948 | -2.694 | 0.244 | -2.584 |
| 05 | 1.326 | -2.484 | -2.163 | -3.325 |
| 06 | 1.236 | -1.525 | -1.215 | -3.126 |
| 07 | 0.626 | -0.144 | -0.628 | -0.313 |
| 08 | 0.119 | -0.49 | -0.23 | 0.383 |
| 09 | -0.788 | -2.694 | 1.222 | -2.484 |
| 10 | 1.296 | -2.819 | -1.358 | -3.573 |
| 11 | 1.3 | -2.819 | -1.421 | -3.573 |
| 12 | 1.322 | -2.234 | -2.394 | -2.961 |
| 13 | -1.138 | 0.763 | 0.31 | -1.77 |
| 14 | -0.25 | -0.25 | -1.77 | 0.821 |
| 15 | -0.016 | -0.879 | 0.663 | -0.415 |
| 16 | 1.025 | -1.114 | -0.673 | -0.979 |
| 17 | 0.898 | -0.754 | -0.357 | -0.979 |
| 18 | 0.821 | -0.788 | -0.335 | -0.584 |
| 19 | -0.281 | 0.174 | 0.361 | -0.477 |