We, Russian scientists of the autosome team, are depressed by the dire events caused by Russian military actions in Ukraine.
We express our condolences to all affected people and sincerely hope for a prompt transition to peace.
Model info
Transcription factorStat1
ModelSTAT1_MOUSE.H11MO.1.A
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceChIP-Seq
Model releaseHOCOMOCOv11
Model length21
Quality
A
Motif rank
1
ConsensusbvdhTKMhRGGAARhvRRvhv
Best auROC (human)0.976
Best auROC (mouse)0.951
Peak sets in benchmark (human)37
Peak sets in benchmark (mouse)128
Aligned words500
TF familySTAT factors {6.2.1}
TF subfamilySTAT1 {6.2.1.0.1}
MGIMGI:103063
EntrezGene
UniProt IDSTAT1_MOUSE
UniProt ACP42225
(TFClass)
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 5.18856
0.0005 6.17051
0.0001 8.158710000000001
GTEx tissue expression atlas Stat1 expression
Motifs in JASPAR
PCM
ACGT
0186.095.0104.0215.0
0285.0133.0213.069.0
03226.058.0134.082.0
0484.092.075.0249.0
0536.012.033.0419.0
0654.09.088.0349.0
07135.0302.019.044.0
0876.0193.037.0194.0
09216.027.0215.042.0
10170.02.0327.01.0
118.04.0478.010.0
12490.01.07.02.0
13494.02.03.01.0
14329.047.069.055.0
15116.0100.058.0226.0
16100.0116.0208.076.0
17194.051.0238.017.0
18305.075.0102.018.0
19292.097.070.041.0
20263.074.070.093.0
2173.0231.0128.068.0
PWM
ACGT
01-0.368-0.271-0.1810.537
02-0.380.0610.528-0.584
030.587-0.7540.069-0.415
04-0.392-0.302-0.5030.683
05-1.215-2.234-1.2981.201
06-0.823-2.484-0.3461.019
070.0760.875-1.818-1.022
08-0.490.43-1.1890.435
090.542-1.4890.537-1.067
100.304-3.5730.954-3.903
11-2.584-3.1261.332-2.394
121.357-3.903-2.694-3.573
131.365-3.573-3.325-3.903
140.96-0.958-0.584-0.805
15-0.074-0.22-0.7540.587
16-0.22-0.0740.504-0.49
170.435-0.8790.638-1.92
180.885-0.503-0.201-1.868
190.841-0.25-0.57-1.09
200.737-0.516-0.57-0.291
21-0.5290.6080.023-0.599