Model info
| Transcription factor | Stat1 | ||||||||
| Model | STAT1_MOUSE.H11MO.1.A | ||||||||
| Model type | Mononucleotide PWM | ||||||||
| LOGO |  | ||||||||
| LOGO (reverse complement) |  | ||||||||
| Data source | ChIP-Seq | ||||||||
| Model release | HOCOMOCOv11 | ||||||||
| Model length | 21 | ||||||||
| Quality | A | ||||||||
| Motif rank | 1 | ||||||||
| Consensus | bvdhTKMhRGGAARhvRRvhv | ||||||||
| Best auROC (human) | 0.976 | ||||||||
| Best auROC (mouse) | 0.951 | ||||||||
| Peak sets in benchmark (human) | 37 | ||||||||
| Peak sets in benchmark (mouse) | 128 | ||||||||
| Aligned words | 500 | ||||||||
| TF family | STAT factors {6.2.1} | ||||||||
| TF subfamily | STAT1 {6.2.1.0.1} | ||||||||
| MGI | MGI:103063 | ||||||||
| EntrezGene | |||||||||
| UniProt ID | STAT1_MOUSE | ||||||||
| UniProt AC | P42225 (TFClass) | ||||||||
| Comment | |||||||||
| Downloads | pcm
pwm alignment threshold to P-value grid | ||||||||
| Standard thresholds |
| ||||||||
| GTEx tissue expression atlas | Stat1 expression | ||||||||
| Motifs in JASPAR |
PCM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 86.0 | 95.0 | 104.0 | 215.0 |
| 02 | 85.0 | 133.0 | 213.0 | 69.0 |
| 03 | 226.0 | 58.0 | 134.0 | 82.0 |
| 04 | 84.0 | 92.0 | 75.0 | 249.0 |
| 05 | 36.0 | 12.0 | 33.0 | 419.0 |
| 06 | 54.0 | 9.0 | 88.0 | 349.0 |
| 07 | 135.0 | 302.0 | 19.0 | 44.0 |
| 08 | 76.0 | 193.0 | 37.0 | 194.0 |
| 09 | 216.0 | 27.0 | 215.0 | 42.0 |
| 10 | 170.0 | 2.0 | 327.0 | 1.0 |
| 11 | 8.0 | 4.0 | 478.0 | 10.0 |
| 12 | 490.0 | 1.0 | 7.0 | 2.0 |
| 13 | 494.0 | 2.0 | 3.0 | 1.0 |
| 14 | 329.0 | 47.0 | 69.0 | 55.0 |
| 15 | 116.0 | 100.0 | 58.0 | 226.0 |
| 16 | 100.0 | 116.0 | 208.0 | 76.0 |
| 17 | 194.0 | 51.0 | 238.0 | 17.0 |
| 18 | 305.0 | 75.0 | 102.0 | 18.0 |
| 19 | 292.0 | 97.0 | 70.0 | 41.0 |
| 20 | 263.0 | 74.0 | 70.0 | 93.0 |
| 21 | 73.0 | 231.0 | 128.0 | 68.0 |
PWM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | -0.368 | -0.271 | -0.181 | 0.537 |
| 02 | -0.38 | 0.061 | 0.528 | -0.584 |
| 03 | 0.587 | -0.754 | 0.069 | -0.415 |
| 04 | -0.392 | -0.302 | -0.503 | 0.683 |
| 05 | -1.215 | -2.234 | -1.298 | 1.201 |
| 06 | -0.823 | -2.484 | -0.346 | 1.019 |
| 07 | 0.076 | 0.875 | -1.818 | -1.022 |
| 08 | -0.49 | 0.43 | -1.189 | 0.435 |
| 09 | 0.542 | -1.489 | 0.537 | -1.067 |
| 10 | 0.304 | -3.573 | 0.954 | -3.903 |
| 11 | -2.584 | -3.126 | 1.332 | -2.394 |
| 12 | 1.357 | -3.903 | -2.694 | -3.573 |
| 13 | 1.365 | -3.573 | -3.325 | -3.903 |
| 14 | 0.96 | -0.958 | -0.584 | -0.805 |
| 15 | -0.074 | -0.22 | -0.754 | 0.587 |
| 16 | -0.22 | -0.074 | 0.504 | -0.49 |
| 17 | 0.435 | -0.879 | 0.638 | -1.92 |
| 18 | 0.885 | -0.503 | -0.201 | -1.868 |
| 19 | 0.841 | -0.25 | -0.57 | -1.09 |
| 20 | 0.737 | -0.516 | -0.57 | -0.291 |
| 21 | -0.529 | 0.608 | 0.023 | -0.599 |