Model info
| Transcription factor | STAT2 (GeneCards) | ||||||||
| Model | STAT2_HUMAN.H11MO.0.A | ||||||||
| Model type | Mononucleotide PWM | ||||||||
| LOGO |  | ||||||||
| LOGO (reverse complement) |  | ||||||||
| Data source | ChIP-Seq | ||||||||
| Model release | HOCOMOCOv11 | ||||||||
| Model length | 19 | ||||||||
| Quality | A | ||||||||
| Motif rank | 0 | ||||||||
| Consensus | dvRRAAhhGAAASYdRRRv | ||||||||
| Best auROC (human) | 0.98 | ||||||||
| Best auROC (mouse) | 0.994 | ||||||||
| Peak sets in benchmark (human) | 11 | ||||||||
| Peak sets in benchmark (mouse) | 8 | ||||||||
| Aligned words | 500 | ||||||||
| TF family | STAT factors {6.2.1} | ||||||||
| TF subfamily | STAT2 {6.2.1.0.2} | ||||||||
| HGNC | HGNC:11363 | ||||||||
| EntrezGene | GeneID:6773 (SSTAR profile) | ||||||||
| UniProt ID | STAT2_HUMAN | ||||||||
| UniProt AC | P52630 (TFClass) | ||||||||
| Comment | |||||||||
| Downloads | pcm
pwm alignment threshold to P-value grid | ||||||||
| Standard thresholds |
| ||||||||
| GTEx tissue expression atlas | STAT2 expression | ||||||||
| ReMap ChIP-seq dataset list | STAT2 datasets | ||||||||
| Motifs in JASPAR |
PCM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 210.0 | 55.0 | 171.0 | 64.0 |
| 02 | 175.0 | 67.0 | 225.0 | 33.0 |
| 03 | 149.0 | 5.0 | 318.0 | 28.0 |
| 04 | 302.0 | 2.0 | 185.0 | 11.0 |
| 05 | 494.0 | 2.0 | 2.0 | 2.0 |
| 06 | 472.0 | 8.0 | 9.0 | 11.0 |
| 07 | 240.0 | 84.0 | 65.0 | 111.0 |
| 08 | 119.0 | 114.0 | 70.0 | 197.0 |
| 09 | 39.0 | 1.0 | 458.0 | 2.0 |
| 10 | 486.0 | 3.0 | 10.0 | 1.0 |
| 11 | 493.0 | 0.0 | 7.0 | 0.0 |
| 12 | 497.0 | 0.0 | 2.0 | 1.0 |
| 13 | 44.0 | 343.0 | 107.0 | 6.0 |
| 14 | 52.0 | 88.0 | 8.0 | 352.0 |
| 15 | 91.0 | 57.0 | 272.0 | 80.0 |
| 16 | 384.0 | 27.0 | 56.0 | 33.0 |
| 17 | 321.0 | 50.0 | 74.0 | 55.0 |
| 18 | 301.0 | 53.0 | 94.0 | 52.0 |
| 19 | 102.0 | 146.0 | 186.0 | 66.0 |
PWM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 0.514 | -0.805 | 0.31 | -0.658 |
| 02 | 0.333 | -0.613 | 0.582 | -1.298 |
| 03 | 0.174 | -2.961 | 0.926 | -1.454 |
| 04 | 0.875 | -3.573 | 0.388 | -2.311 |
| 05 | 1.365 | -3.573 | -3.573 | -3.573 |
| 06 | 1.32 | -2.584 | -2.484 | -2.311 |
| 07 | 0.646 | -0.392 | -0.643 | -0.117 |
| 08 | -0.049 | -0.091 | -0.57 | 0.45 |
| 09 | -1.138 | -3.903 | 1.29 | -3.573 |
| 10 | 1.349 | -3.325 | -2.394 | -3.903 |
| 11 | 1.363 | -4.4 | -2.694 | -4.4 |
| 12 | 1.371 | -4.4 | -3.573 | -3.903 |
| 13 | -1.022 | 1.002 | -0.153 | -2.819 |
| 14 | -0.86 | -0.346 | -2.584 | 1.027 |
| 15 | -0.313 | -0.771 | 0.771 | -0.439 |
| 16 | 1.114 | -1.489 | -0.788 | -1.298 |
| 17 | 0.936 | -0.898 | -0.516 | -0.805 |
| 18 | 0.872 | -0.841 | -0.281 | -0.86 |
| 19 | -0.201 | 0.154 | 0.393 | -0.628 |