Model info
| Transcription factor | STAT4 (GeneCards) | ||||||||
| Model | STAT4_HUMAN.H11MO.0.A | ||||||||
| Model type | Mononucleotide PWM | ||||||||
| LOGO |  | ||||||||
| LOGO (reverse complement) |  | ||||||||
| Data source | ChIP-Seq | ||||||||
| Model release | HOCOMOCOv11 | ||||||||
| Model length | 11 | ||||||||
| Quality | A | ||||||||
| Motif rank | 0 | ||||||||
| Consensus | YTTCYYdKMAv | ||||||||
| Best auROC (human) | 0.935 | ||||||||
| Best auROC (mouse) | 0.887 | ||||||||
| Peak sets in benchmark (human) | 7 | ||||||||
| Peak sets in benchmark (mouse) | 10 | ||||||||
| Aligned words | 500 | ||||||||
| TF family | STAT factors {6.2.1} | ||||||||
| TF subfamily | STAT4 {6.2.1.0.4} | ||||||||
| HGNC | HGNC:11365 | ||||||||
| EntrezGene | GeneID:6775 (SSTAR profile) | ||||||||
| UniProt ID | STAT4_HUMAN | ||||||||
| UniProt AC | Q14765 (TFClass) | ||||||||
| Comment | |||||||||
| Downloads | pcm
pwm alignment threshold to P-value grid | ||||||||
| Standard thresholds |
| ||||||||
| GTEx tissue expression atlas | STAT4 expression | ||||||||
| ReMap ChIP-seq dataset list | STAT4 datasets | ||||||||
| Motifs in JASPAR |
PCM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 26.0 | 176.0 | 19.0 | 279.0 |
| 02 | 0.0 | 6.0 | 1.0 | 493.0 |
| 03 | 1.0 | 5.0 | 5.0 | 489.0 |
| 04 | 10.0 | 471.0 | 2.0 | 17.0 |
| 05 | 4.0 | 276.0 | 6.0 | 214.0 |
| 06 | 6.0 | 179.0 | 89.0 | 226.0 |
| 07 | 142.0 | 54.0 | 225.0 | 79.0 |
| 08 | 33.0 | 53.0 | 290.0 | 124.0 |
| 09 | 321.0 | 165.0 | 3.0 | 11.0 |
| 10 | 478.0 | 3.0 | 8.0 | 11.0 |
| 11 | 161.0 | 94.0 | 178.0 | 67.0 |
PWM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | -1.525 | 0.339 | -1.818 | 0.796 |
| 02 | -4.4 | -2.819 | -3.903 | 1.363 |
| 03 | -3.903 | -2.961 | -2.961 | 1.355 |
| 04 | -2.394 | 1.317 | -3.573 | -1.92 |
| 05 | -3.126 | 0.785 | -2.819 | 0.533 |
| 06 | -2.819 | 0.355 | -0.335 | 0.587 |
| 07 | 0.126 | -0.823 | 0.582 | -0.452 |
| 08 | -1.298 | -0.841 | 0.835 | -0.008 |
| 09 | 0.936 | 0.275 | -3.325 | -2.311 |
| 10 | 1.332 | -3.325 | -2.584 | -2.311 |
| 11 | 0.25 | -0.281 | 0.35 | -0.613 |