Transcription factor | STAT6 (GeneCards) | ||||||||
Model | STAT6_HUMAN.H11DI.0.A | ||||||||
Model type | Dinucleotide PWM | ||||||||
LOGO | |||||||||
LOGO (reverse complement) | |||||||||
Data source | ChIP-Seq | ||||||||
Model release | HOCOMOCOv11 | ||||||||
Model length | 15 | ||||||||
Quality | A | ||||||||
Motif rank | 0 | ||||||||
Consensus | ndvRvAGGAARbvdn | ||||||||
Best auROC (human) | 0.874 | ||||||||
Best auROC (mouse) | 0.834 | ||||||||
Peak sets in benchmark (human) | 19 | ||||||||
Peak sets in benchmark (mouse) | 24 | ||||||||
Aligned words | 506 | ||||||||
TF family | STAT factors {6.2.1} | ||||||||
TF subfamily | STAT6 {6.2.1.0.7} | ||||||||
HGNC | HGNC:11368 | ||||||||
EntrezGene | GeneID:6778 (SSTAR profile) | ||||||||
UniProt ID | STAT6_HUMAN | ||||||||
UniProt AC | P42226 (TFClass) | ||||||||
Comment | |||||||||
Downloads | pcm
pwm alignment threshold to P-value grid | ||||||||
Standard thresholds |
| ||||||||
GTEx tissue expression atlas | STAT6 expression | ||||||||
ReMap ChIP-seq dataset list | STAT6 datasets | ||||||||
Motifs in JASPAR |
AA | AC | AG | AT | CA | CC | CG | CT | GA | GC | GG | GT | TA | TC | TG | TT | |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
01 | 56.0 | 18.0 | 33.0 | 20.0 | 64.0 | 14.0 | 6.0 | 23.0 | 68.0 | 9.0 | 38.0 | 29.0 | 32.0 | 19.0 | 22.0 | 49.0 |
02 | 96.0 | 34.0 | 86.0 | 4.0 | 23.0 | 17.0 | 14.0 | 6.0 | 32.0 | 24.0 | 34.0 | 9.0 | 13.0 | 60.0 | 39.0 | 9.0 |
03 | 106.0 | 5.0 | 48.0 | 5.0 | 91.0 | 17.0 | 12.0 | 15.0 | 73.0 | 15.0 | 73.0 | 12.0 | 16.0 | 5.0 | 5.0 | 2.0 |
04 | 51.0 | 141.0 | 87.0 | 7.0 | 6.0 | 25.0 | 9.0 | 2.0 | 40.0 | 55.0 | 42.0 | 1.0 | 1.0 | 16.0 | 15.0 | 2.0 |
05 | 83.0 | 5.0 | 7.0 | 3.0 | 215.0 | 14.0 | 2.0 | 6.0 | 138.0 | 5.0 | 9.0 | 1.0 | 10.0 | 0.0 | 2.0 | 0.0 |
06 | 7.0 | 1.0 | 428.0 | 10.0 | 1.0 | 0.0 | 20.0 | 3.0 | 1.0 | 0.0 | 19.0 | 0.0 | 1.0 | 0.0 | 8.0 | 1.0 |
07 | 0.0 | 0.0 | 10.0 | 0.0 | 0.0 | 0.0 | 1.0 | 0.0 | 3.0 | 12.0 | 456.0 | 4.0 | 0.0 | 1.0 | 13.0 | 0.0 |
08 | 3.0 | 0.0 | 0.0 | 0.0 | 13.0 | 0.0 | 0.0 | 0.0 | 464.0 | 7.0 | 4.0 | 5.0 | 4.0 | 0.0 | 0.0 | 0.0 |
09 | 443.0 | 3.0 | 6.0 | 32.0 | 6.0 | 0.0 | 0.0 | 1.0 | 4.0 | 0.0 | 0.0 | 0.0 | 4.0 | 0.0 | 1.0 | 0.0 |
10 | 157.0 | 30.0 | 255.0 | 15.0 | 0.0 | 0.0 | 2.0 | 1.0 | 2.0 | 2.0 | 2.0 | 1.0 | 1.0 | 1.0 | 31.0 | 0.0 |
11 | 10.0 | 47.0 | 30.0 | 73.0 | 6.0 | 3.0 | 0.0 | 24.0 | 31.0 | 73.0 | 48.0 | 138.0 | 0.0 | 2.0 | 8.0 | 7.0 |
12 | 9.0 | 9.0 | 21.0 | 8.0 | 38.0 | 37.0 | 32.0 | 18.0 | 16.0 | 16.0 | 47.0 | 7.0 | 19.0 | 39.0 | 149.0 | 35.0 |
13 | 24.0 | 14.0 | 32.0 | 12.0 | 38.0 | 8.0 | 27.0 | 28.0 | 75.0 | 20.0 | 129.0 | 25.0 | 17.0 | 15.0 | 23.0 | 13.0 |
14 | 55.0 | 34.0 | 43.0 | 22.0 | 12.0 | 14.0 | 5.0 | 26.0 | 43.0 | 45.0 | 78.0 | 45.0 | 10.0 | 16.0 | 38.0 | 14.0 |
AA | AC | AG | AT | CA | CC | CG | CT | GA | GC | GG | GT | TA | TC | TG | TT | |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
01 | 0.578 | -0.543 | 0.054 | -0.439 | 0.711 | -0.788 | -1.6 | -0.302 | 0.771 | -1.215 | 0.193 | -0.074 | 0.023 | -0.49 | -0.346 | 0.445 |
02 | 1.114 | 0.083 | 1.004 | -1.975 | -0.302 | -0.599 | -0.788 | -1.6 | 0.023 | -0.26 | 0.083 | -1.215 | -0.86 | 0.646 | 0.219 | -1.215 |
03 | 1.213 | -1.77 | 0.425 | -1.77 | 1.061 | -0.599 | -0.938 | -0.721 | 0.841 | -0.721 | 0.841 | -0.938 | -0.658 | -1.77 | -1.77 | -2.584 |
04 | 0.485 | 1.497 | 1.016 | -1.454 | -1.6 | -0.22 | -1.215 | -2.584 | 0.244 | 0.56 | 0.293 | -3.126 | -3.126 | -0.658 | -0.721 | -2.584 |
05 | 0.969 | -1.77 | -1.454 | -2.234 | 1.918 | -0.788 | -2.584 | -1.6 | 1.476 | -1.77 | -1.215 | -3.126 | -1.114 | -4.4 | -2.584 | -4.4 |
06 | -1.454 | -3.126 | 2.606 | -1.114 | -3.126 | -4.4 | -0.439 | -2.234 | -3.126 | -4.4 | -0.49 | -4.4 | -3.126 | -4.4 | -1.328 | -3.126 |
07 | -4.4 | -4.4 | -1.114 | -4.4 | -4.4 | -4.4 | -3.126 | -4.4 | -2.234 | -0.938 | 2.669 | -1.975 | -4.4 | -3.126 | -0.86 | -4.4 |
08 | -2.234 | -4.4 | -4.4 | -4.4 | -0.86 | -4.4 | -4.4 | -4.4 | 2.686 | -1.454 | -1.975 | -1.77 | -1.975 | -4.4 | -4.4 | -4.4 |
09 | 2.64 | -2.234 | -1.6 | 0.023 | -1.6 | -4.4 | -4.4 | -3.126 | -1.975 | -4.4 | -4.4 | -4.4 | -1.975 | -4.4 | -3.126 | -4.4 |
10 | 1.604 | -0.04 | 2.088 | -0.721 | -4.4 | -4.4 | -2.584 | -3.126 | -2.584 | -2.584 | -2.584 | -3.126 | -3.126 | -3.126 | -0.008 | -4.4 |
11 | -1.114 | 0.404 | -0.04 | 0.841 | -1.6 | -2.234 | -4.4 | -0.26 | -0.008 | 0.841 | 0.425 | 1.476 | -4.4 | -2.584 | -1.328 | -1.454 |
12 | -1.215 | -1.215 | -0.392 | -1.328 | 0.193 | 0.167 | 0.023 | -0.543 | -0.658 | -0.658 | 0.404 | -1.454 | -0.49 | 0.219 | 1.552 | 0.112 |
13 | -0.26 | -0.788 | 0.023 | -0.938 | 0.193 | -1.328 | -0.144 | -0.108 | 0.868 | -0.439 | 1.408 | -0.22 | -0.599 | -0.721 | -0.302 | -0.86 |
14 | 0.56 | 0.083 | 0.316 | -0.346 | -0.938 | -0.788 | -1.77 | -0.181 | 0.316 | 0.361 | 0.907 | 0.361 | -1.114 | -0.658 | 0.193 | -0.788 |