Model info
| Transcription factor | STAT6 (GeneCards) | ||||||||
| Model | STAT6_HUMAN.H11MO.0.B | ||||||||
| Model type | Mononucleotide PWM | ||||||||
| LOGO |  | ||||||||
| LOGO (reverse complement) |  | ||||||||
| Data source | ChIP-Seq | ||||||||
| Model release | HOCOMOCOv11 | ||||||||
| Model length | 11 | ||||||||
| Quality | B | ||||||||
| Motif rank | 0 | ||||||||
| Consensus | TTCYbWRGAAv | ||||||||
| Best auROC (human) | 0.766 | ||||||||
| Best auROC (mouse) | 0.912 | ||||||||
| Peak sets in benchmark (human) | 19 | ||||||||
| Peak sets in benchmark (mouse) | 24 | ||||||||
| Aligned words | 502 | ||||||||
| TF family | STAT factors {6.2.1} | ||||||||
| TF subfamily | STAT6 {6.2.1.0.7} | ||||||||
| HGNC | HGNC:11368 | ||||||||
| EntrezGene | GeneID:6778 (SSTAR profile) | ||||||||
| UniProt ID | STAT6_HUMAN | ||||||||
| UniProt AC | P42226 (TFClass) | ||||||||
| Comment | |||||||||
| Downloads | pcm
pwm alignment threshold to P-value grid | ||||||||
| Standard thresholds |
| ||||||||
| GTEx tissue expression atlas | STAT6 expression | ||||||||
| ReMap ChIP-seq dataset list | STAT6 datasets | ||||||||
| Motifs in JASPAR |
PCM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 7.0 | 59.0 | 36.0 | 398.0 |
| 02 | 17.0 | 19.0 | 27.0 | 437.0 |
| 03 | 42.0 | 434.0 | 8.0 | 16.0 |
| 04 | 92.0 | 120.0 | 17.0 | 271.0 |
| 05 | 39.0 | 240.0 | 162.0 | 59.0 |
| 06 | 263.0 | 90.0 | 1.0 | 146.0 |
| 07 | 131.0 | 6.0 | 346.0 | 17.0 |
| 08 | 16.0 | 3.0 | 466.0 | 15.0 |
| 09 | 471.0 | 16.0 | 9.0 | 4.0 |
| 10 | 463.0 | 5.0 | 27.0 | 5.0 |
| 11 | 212.0 | 104.0 | 162.0 | 22.0 |
PWM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | -2.694 | -0.737 | -1.215 | 1.15 |
| 02 | -1.92 | -1.818 | -1.489 | 1.243 |
| 03 | -1.067 | 1.236 | -2.584 | -1.975 |
| 04 | -0.302 | -0.04 | -1.92 | 0.767 |
| 05 | -1.138 | 0.646 | 0.256 | -0.737 |
| 06 | 0.737 | -0.324 | -3.903 | 0.154 |
| 07 | 0.046 | -2.819 | 1.01 | -1.92 |
| 08 | -1.975 | -3.325 | 1.307 | -2.034 |
| 09 | 1.317 | -1.975 | -2.484 | -3.126 |
| 10 | 1.3 | -2.961 | -1.489 | -2.961 |
| 11 | 0.523 | -0.181 | 0.256 | -1.681 |