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Model info
Transcription factorRBPJ
(GeneCards)
ModelSUH_HUMAN.H11DI.0.A
Model typeDinucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceChIP-Seq
Model releaseHOCOMOCOv11
Model length12
Quality
A
Motif rank
0
ConsensusnbYSTGRGAAvn
Best auROC (human)0.952
Best auROC (mouse)0.956
Peak sets in benchmark (human)25
Peak sets in benchmark (mouse)6
Aligned words521
TF familyCSL-related factors {6.1.4}
TF subfamilyM {6.1.4.1}
HGNCHGNC:5724
EntrezGeneGeneID:3516
(SSTAR profile)
UniProt IDSUH_HUMAN
UniProt ACQ06330
(TFClass)
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 9.582640000000001
0.0005 12.15334
0.0001 16.017525
GTEx tissue expression atlas RBPJ expression
ReMap ChIP-seq dataset list RBPJ datasets
Motifs in JASPAR
MA1116.1 (RBPJ; Homo sapiens)
PCM
AAACAGATCACCCGCTGAGCGGGTTATCTGTT
0110.048.040.026.020.070.06.023.05.056.061.018.04.042.058.013.0
020.020.07.012.06.0101.09.0100.04.077.018.066.01.029.030.020.0
032.03.06.00.058.071.092.06.08.015.038.03.017.027.0148.06.0
040.00.00.085.01.00.00.0115.00.01.02.0281.00.00.00.015.0
050.00.01.00.00.00.01.00.00.00.02.00.01.00.0494.01.0
060.00.01.00.00.00.00.00.0155.00.0293.050.01.00.00.00.0
070.00.0154.02.00.00.00.00.02.01.0289.02.00.00.050.00.0
082.00.00.00.01.00.00.00.0490.00.01.02.04.00.00.00.0
09442.04.051.00.00.00.00.00.01.00.00.00.02.00.00.00.0
10194.0153.061.037.02.01.00.01.014.026.02.09.00.00.00.00.0
1170.042.065.033.064.038.014.064.016.010.019.018.07.08.016.016.0
PWM
AAACAGATCACCCGCTGAGCGGGTTATCTGTT
01-1.1140.4250.244-0.181-0.4390.8-1.6-0.302-1.770.5780.663-0.543-1.9750.2930.613-0.86
02-4.4-0.439-1.454-0.938-1.61.165-1.2151.155-1.9750.894-0.5430.741-3.126-0.074-0.04-0.439
03-2.584-2.234-1.6-4.40.6130.8141.072-1.6-1.328-0.7210.193-2.234-0.599-0.1441.545-1.6
04-4.4-4.4-4.40.993-3.126-4.4-4.41.294-4.4-3.126-2.5842.185-4.4-4.4-4.4-0.721
05-4.4-4.4-3.126-4.4-4.4-4.4-3.126-4.4-4.4-4.4-2.584-4.4-3.126-4.42.749-3.126
06-4.4-4.4-3.126-4.4-4.4-4.4-4.4-4.41.592-4.42.2270.465-3.126-4.4-4.4-4.4
07-4.4-4.41.585-2.584-4.4-4.4-4.4-4.4-2.584-3.1262.213-2.584-4.4-4.40.465-4.4
08-2.584-4.4-4.4-4.4-3.126-4.4-4.4-4.42.741-4.4-3.126-2.584-1.975-4.4-4.4-4.4
092.638-1.9750.485-4.4-4.4-4.4-4.4-4.4-3.126-4.4-4.4-4.4-2.584-4.4-4.4-4.4
101.8151.5790.6630.167-2.584-3.126-4.4-3.126-0.788-0.181-2.584-1.215-4.4-4.4-4.4-4.4
110.80.2930.7260.0540.7110.193-0.7880.711-0.658-1.114-0.49-0.543-1.454-1.328-0.658-0.658