TAL1_HUMAN.H11DI.0.A motif - HOmo sapiens COmprehensive MOdel COllection

Transcription factor

TAL1
(GeneCards)

Model

TAL1_HUMAN.H11DI.0.A

Model type

Dinucleotide PWM

LOGO

LOGO (reverse complement)

Data source

ChIP-Seq

Model release

HOCOMOCOv11

Model length

Quality

Motif rank

Consensus

nnnbYKbnnnnnnbWGATAAvvn

Best auROC (human)

0.99

Best auROC (mouse)

0.977

Peak sets in benchmark (human)

Peak sets in benchmark (mouse)

Aligned words

503

TF family

Tal-related factors {1.2.3}

TF subfamily

Tal / HEN-like factors {1.2.3.1}

HGNC

HGNC:11556

EntrezGene

GeneID:6886
(SSTAR profile)

UniProt ID

TAL1_HUMAN

UniProt AC

P17542
(TFClass)

Comment

Downloads

pcm
pwm
alignment
threshold to P-value grid

Standard thresholds

P-value	Threshold
0.001	7.071760000000001
0.0005	9.525210000000001
0.0001	14.28151

GTEx tissue expression atlas

TAL1 expression

ReMap ChIP-seq dataset list

TAL1 datasets

Motifs in JASPAR

MA0091.1 (TAL1::TCF3; Homo sapiens)

MA0140.1 (Tal1::Gata1; Mus musculus)

MA0140.2 (GATA1::TAL1; Homo sapiens)

PCM

	AA	AC	AG	AT	CA	CC	CG	CT	GA	GC	GG	GT	TA	TC	TG	TT
01	29.063	25.063	34.063	16.063	86.063	37.063	26.063	23.063	17.063	49.063	59.063	20.063	4.063	16.063	47.063	11.063
02	19.063	25.063	55.063	37.063	42.063	29.063	6.063	50.063	15.063	82.063	32.063	37.063	5.063	25.063	24.063	16.063
03	6.063	20.063	45.063	10.063	28.063	80.063	9.063	44.063	13.063	60.063	32.063	12.063	10.063	79.063	42.063	9.063
04	4.063	14.063	12.063	27.063	17.063	26.063	3.063	193.063	8.063	32.063	17.063	71.063	5.063	14.063	43.063	13.063
05	4.063	4.063	19.063	7.063	10.063	6.063	5.063	65.063	6.063	6.063	19.063	44.063	1.063	6.063	283.063	14.063
06	3.063	2.063	16.063	0.063	2.063	12.063	2.063	6.063	21.063	117.063	111.063	77.063	1.063	7.063	108.063	14.063
07	8.063	2.063	17.063	0.063	48.063	27.063	10.063	53.063	35.063	68.063	67.063	67.063	20.063	14.063	39.063	24.063
08	27.063	25.063	46.063	13.063	47.063	32.063	12.063	20.063	37.063	38.063	35.063	23.063	13.063	29.063	71.063	31.063
09	41.063	20.063	56.063	7.063	36.063	36.063	11.063	41.063	34.063	46.063	56.063	28.063	11.063	11.063	47.063	18.063
10	30.063	23.063	58.063	11.063	29.063	28.063	14.063	42.063	36.063	51.063	66.063	17.063	3.063	27.063	34.063	30.063
11	18.063	18.063	48.063	14.063	25.063	61.063	5.063	38.063	27.063	57.063	58.063	30.063	12.063	25.063	38.063	25.063
12	23.063	14.063	35.063	10.063	68.063	41.063	9.063	43.063	32.063	36.063	54.063	27.063	19.063	24.063	45.063	19.063
13	14.063	77.063	42.063	9.063	11.063	74.063	7.063	23.063	18.063	72.063	44.063	9.063	6.063	39.063	42.063	12.063
14	38.063	3.063	2.063	6.063	141.063	4.063	0.063	117.063	91.063	3.063	1.063	40.063	27.063	1.063	0.063	25.063
15	0.063	0.063	297.063	0.063	0.063	0.063	11.063	0.063	0.063	0.063	3.063	0.063	0.063	0.063	188.063	0.063
16	0.25	0.0	0.0	0.0	0.25	0.0	0.0	0.0	496.25	1.0	0.0	2.0	0.25	0.0	0.0	0.0
17	0.0	2.0	0.0	495.0	0.0	0.0	0.0	1.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	2.0
18	0.0	0.0	0.0	0.0	2.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	477.0	1.0	1.0	19.0
19	397.0	10.0	66.0	6.0	1.0	0.0	0.0	0.0	1.0	0.0	0.0	0.0	16.0	1.0	1.0	1.0
20	73.0	64.0	251.0	27.0	3.0	6.0	1.0	1.0	4.0	21.0	17.0	25.0	0.0	0.0	6.0	1.0
21	20.0	14.0	45.0	1.0	52.0	8.0	17.0	14.0	81.0	64.0	109.0	21.0	12.0	6.0	31.0	5.0
22	39.0	37.0	66.0	23.0	44.0	21.0	4.0	23.0	51.0	68.0	57.0	26.0	5.0	13.0	21.0	2.0

PWM

	AA	AC	AG	AT	CA	CC	CG	CT	GA	GC	GG	GT	TA	TC	TG	TT
01	-0.072	-0.218	0.085	-0.654	1.005	0.169	-0.179	-0.299	-0.595	0.447	0.631	-0.436	-1.961	-0.654	0.405	-1.016
02	-0.486	-0.218	0.561	0.169	0.294	-0.072	-1.59	0.467	-0.717	0.958	0.025	0.169	-1.759	-0.218	-0.258	-0.654
03	-1.59	-0.436	0.362	-1.108	-0.106	0.933	-1.208	0.34	-0.855	0.647	0.025	-0.933	-1.108	0.921	0.294	-1.208
04	-1.961	-0.784	-0.933	-0.142	-0.595	-0.179	-2.216	1.811	-1.32	0.025	-0.595	0.815	-1.759	-0.784	0.317	-0.855
05	-1.961	-1.961	-0.486	-1.446	-1.108	-1.59	-1.759	0.727	-1.59	-1.59	-0.486	0.34	-3.082	-1.59	2.193	-0.784
06	-2.216	-2.558	-0.654	-4.251	-2.558	-0.933	-2.558	-1.59	-0.389	1.312	1.259	0.895	-3.082	-1.446	1.232	-0.784
07	-1.32	-2.558	-0.595	-4.251	0.426	-0.142	-1.108	0.524	0.114	0.772	0.757	0.757	-0.436	-0.784	0.221	-0.258
08	-0.142	-0.218	0.384	-0.855	0.405	0.025	-0.933	-0.436	0.169	0.195	0.114	-0.299	-0.855	-0.072	0.815	-0.006
09	0.27	-0.436	0.579	-1.446	0.142	0.142	-1.016	0.27	0.085	0.384	0.579	-0.106	-1.016	-1.016	0.405	-0.539
10	-0.038	-0.299	0.614	-1.016	-0.072	-0.106	-0.784	0.294	0.142	0.486	0.742	-0.595	-2.216	-0.142	0.085	-0.038
11	-0.539	-0.539	0.426	-0.784	-0.218	0.664	-1.759	0.195	-0.142	0.597	0.614	-0.038	-0.933	-0.218	0.195	-0.218
12	-0.299	-0.784	0.114	-1.108	0.772	0.27	-1.208	0.317	0.025	0.142	0.543	-0.142	-0.486	-0.258	0.362	-0.486
13	-0.784	0.895	0.294	-1.208	-1.016	0.856	-1.446	-0.299	-0.539	0.829	0.34	-1.208	-1.59	0.221	0.294	-0.933
14	0.195	-2.216	-2.558	-1.59	1.498	-1.961	-4.251	1.312	1.061	-2.216	-3.082	0.246	-0.142	-3.082	-4.251	-0.218
15	-4.251	-4.251	2.241	-4.251	-4.251	-4.251	-1.016	-4.251	-4.251	-4.251	-2.216	-4.251	-4.251	-4.251	1.784	-4.251
16	-3.903	-4.4	-4.4	-4.4	-3.903	-4.4	-4.4	-4.4	2.753	-3.126	-4.4	-2.584	-3.903	-4.4	-4.4	-4.4
17	-4.4	-2.584	-4.4	2.751	-4.4	-4.4	-4.4	-3.126	-4.4	-4.4	-4.4	-4.4	-4.4	-4.4	-4.4	-2.584
18	-4.4	-4.4	-4.4	-4.4	-2.584	-4.4	-4.4	-4.4	-4.4	-4.4	-4.4	-4.4	2.714	-3.126	-3.126	-0.49
19	2.531	-1.114	0.741	-1.6	-3.126	-4.4	-4.4	-4.4	-3.126	-4.4	-4.4	-4.4	-0.658	-3.126	-3.126	-3.126
20	0.841	0.711	2.073	-0.144	-2.234	-1.6	-3.126	-3.126	-1.975	-0.392	-0.599	-0.22	-4.4	-4.4	-1.6	-3.126
21	-0.439	-0.788	0.361	-3.126	0.504	-1.328	-0.599	-0.788	0.945	0.711	1.241	-0.392	-0.938	-1.6	-0.008	-1.77
22	0.219	0.167	0.741	-0.302	0.339	-0.392	-1.975	-0.302	0.485	0.771	0.595	-0.181	-1.77	-0.86	-0.392	-2.584