Model info
| Transcription factor | Tal1 | ||||||||
| Model | TAL1_MOUSE.H11MO.0.A | ||||||||
| Model type | Mononucleotide PWM | ||||||||
| LOGO |  | ||||||||
| LOGO (reverse complement) |  | ||||||||
| Data source | ChIP-Seq | ||||||||
| Model release | HOCOMOCOv11 | ||||||||
| Model length | 20 | ||||||||
| Quality | A | ||||||||
| Motif rank | 0 | ||||||||
| Consensus | bYKbnnnnndvAGATAASvv | ||||||||
| Best auROC (human) | 0.965 | ||||||||
| Best auROC (mouse) | 0.978 | ||||||||
| Peak sets in benchmark (human) | 68 | ||||||||
| Peak sets in benchmark (mouse) | 76 | ||||||||
| Aligned words | 500 | ||||||||
| TF family | Tal-related factors {1.2.3} | ||||||||
| TF subfamily | Tal / HEN-like factors {1.2.3.1} | ||||||||
| MGI | MGI:98480 | ||||||||
| EntrezGene | GeneID:21349 (SSTAR profile) | ||||||||
| UniProt ID | TAL1_MOUSE | ||||||||
| UniProt AC | P22091 (TFClass) | ||||||||
| Comment | |||||||||
| Downloads | pcm
pwm alignment threshold to P-value grid | ||||||||
| Standard thresholds |
| ||||||||
| GTEx tissue expression atlas | Tal1 expression | ||||||||
| Motifs in JASPAR |
PCM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 57.0 | 270.0 | 101.0 | 72.0 |
| 02 | 35.0 | 98.0 | 67.0 | 300.0 |
| 03 | 9.0 | 22.0 | 326.0 | 143.0 |
| 04 | 45.0 | 136.0 | 215.0 | 104.0 |
| 05 | 89.0 | 132.0 | 147.0 | 132.0 |
| 06 | 130.0 | 109.0 | 136.0 | 125.0 |
| 07 | 130.0 | 109.0 | 163.0 | 98.0 |
| 08 | 144.0 | 100.0 | 134.0 | 122.0 |
| 09 | 118.0 | 121.0 | 136.0 | 125.0 |
| 10 | 205.0 | 70.0 | 126.0 | 99.0 |
| 11 | 90.0 | 193.0 | 170.0 | 47.0 |
| 12 | 342.0 | 9.0 | 0.0 | 149.0 |
| 13 | 1.0 | 0.0 | 499.0 | 0.0 |
| 14 | 495.0 | 1.0 | 1.0 | 3.0 |
| 15 | 3.0 | 6.0 | 4.0 | 487.0 |
| 16 | 491.0 | 1.0 | 0.0 | 8.0 |
| 17 | 462.0 | 3.0 | 28.0 | 7.0 |
| 18 | 77.0 | 88.0 | 301.0 | 34.0 |
| 19 | 199.0 | 91.0 | 187.0 | 23.0 |
| 20 | 194.0 | 108.0 | 127.0 | 71.0 |
PWM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | -0.771 | 0.763 | -0.21 | -0.543 |
| 02 | -1.242 | -0.24 | -0.613 | 0.868 |
| 03 | -2.484 | -1.681 | 0.951 | 0.133 |
| 04 | -1.0 | 0.083 | 0.537 | -0.181 |
| 05 | -0.335 | 0.054 | 0.16 | 0.054 |
| 06 | 0.039 | -0.135 | 0.083 | 0.0 |
| 07 | 0.039 | -0.135 | 0.263 | -0.24 |
| 08 | 0.14 | -0.22 | 0.069 | -0.024 |
| 09 | -0.057 | -0.032 | 0.083 | 0.0 |
| 10 | 0.49 | -0.57 | 0.008 | -0.23 |
| 11 | -0.324 | 0.43 | 0.304 | -0.958 |
| 12 | 0.999 | -2.484 | -4.4 | 0.174 |
| 13 | -3.903 | -4.4 | 1.375 | -4.4 |
| 14 | 1.367 | -3.903 | -3.903 | -3.325 |
| 15 | -3.325 | -2.819 | -3.126 | 1.351 |
| 16 | 1.359 | -3.903 | -4.4 | -2.584 |
| 17 | 1.298 | -3.325 | -1.454 | -2.694 |
| 18 | -0.477 | -0.346 | 0.872 | -1.27 |
| 19 | 0.46 | -0.313 | 0.399 | -1.64 |
| 20 | 0.435 | -0.144 | 0.016 | -0.556 |