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Model info
Transcription factorTBP
(GeneCards)
ModelTBP_HUMAN.H11DI.0.A
Model typeDinucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceChIP-Seq
Model releaseHOCOMOCOv11
Model length13
Quality
A
Motif rank
0
ConsensusvWWKAAAWRvvvn
Best auROC (human)0.938
Best auROC (mouse)0.882
Peak sets in benchmark (human)21
Peak sets in benchmark (mouse)45
Aligned words502
TF familyTBP-related factors {8.1.1}
TF subfamilyTBP {8.1.1.0.1}
HGNCHGNC:11588
EntrezGeneGeneID:6908
(SSTAR profile)
UniProt IDTBP_HUMAN
UniProt ACP20226
(TFClass)
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 11.60361
0.0005 12.870360000000002
0.0001 15.249179999999999
GTEx tissue expression atlas TBP expression
ReMap ChIP-seq dataset list TBP datasets
Motifs in JASPAR
MA0108.1 (TBP; )
MA0108.2 (TBP; )
PCM
AAACAGATCACCCGCTGAGCGGGTTATCTGTT
0127.07.015.036.012.029.03.0169.031.012.018.065.02.012.08.054.0
0256.01.09.06.034.02.02.022.033.01.03.07.0239.08.013.064.0
0312.019.085.0246.00.03.05.04.00.00.018.09.00.01.024.074.0
0411.00.01.00.021.00.01.01.0123.03.05.01.0325.01.04.03.0
05421.03.04.052.04.00.00.00.07.01.00.03.04.00.01.00.0
06378.012.041.05.03.00.00.01.03.00.02.00.053.00.01.01.0
07233.011.080.0113.07.00.01.04.024.01.07.012.04.00.03.00.0
0898.016.0145.09.04.02.06.00.023.013.048.07.087.03.028.011.0
0943.055.085.029.07.012.05.010.029.053.0114.031.04.011.011.01.0
1033.026.018.06.049.035.032.015.060.078.065.012.08.024.034.05.0
1178.019.042.011.064.030.056.013.053.035.052.09.011.012.014.01.0
1262.042.073.029.013.023.043.017.042.051.050.021.05.09.012.08.0
PWM
AAACAGATCACCCGCTGAGCGGGTTATCTGTT
01-0.144-1.454-0.7210.14-0.938-0.074-2.2341.678-0.008-0.938-0.5430.726-2.584-0.938-1.3280.542
020.578-3.126-1.215-1.60.083-2.584-2.584-0.3460.054-3.126-2.234-1.4542.024-1.328-0.860.711
03-0.938-0.490.9932.053-4.4-2.234-1.77-1.975-4.4-4.4-0.543-1.215-4.4-3.126-0.260.855
04-1.022-4.4-3.126-4.4-0.392-4.4-3.126-3.1261.361-2.234-1.77-3.1262.331-3.126-1.975-2.234
052.589-2.234-1.9750.504-1.975-4.4-4.4-4.4-1.454-3.126-4.4-2.234-1.975-4.4-3.126-4.4
062.482-0.9380.269-1.77-2.234-4.4-4.4-3.126-2.234-4.4-2.584-4.40.523-4.4-3.126-3.126
071.998-1.0220.9321.276-1.454-4.4-3.126-1.975-0.26-3.126-1.454-0.938-1.975-4.4-2.234-4.4
081.135-0.6581.525-1.215-1.975-2.584-1.6-4.4-0.302-0.860.425-1.4541.016-2.234-0.108-1.022
090.3160.560.993-0.074-1.454-0.938-1.77-1.114-0.0740.5231.285-0.008-1.975-1.022-1.022-3.126
100.054-0.181-0.543-1.60.4450.1120.023-0.7210.6460.9070.726-0.938-1.328-0.260.083-1.77
110.907-0.490.293-1.0220.711-0.040.578-0.860.5230.1120.504-1.215-1.022-0.938-0.788-3.126
120.6790.2930.841-0.074-0.86-0.3020.316-0.5990.2930.4850.465-0.392-1.77-1.215-0.938-1.328