We, Russian scientists of the autosome team, are depressed by the dire events caused by Russian military actions in Ukraine.
We express our condolences to all affected people and sincerely hope for a prompt transition to peace.
Model info
Transcription factorTBX21
(GeneCards)
ModelTBX21_HUMAN.H11DI.0.A
Model typeDinucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceChIP-Seq
Model releaseHOCOMOCOv11
Model length15
Quality
A
Motif rank
0
ConsensusnvdvdRRGTGWKRdn
Best auROC (human)0.832
Best auROC (mouse)0.841
Peak sets in benchmark (human)7
Peak sets in benchmark (mouse)17
Aligned words501
TF familyTBrain-related factors {6.5.2}
TF subfamilyTBX21 (T-bet) {6.5.2.0.3}
HGNCHGNC:11599
EntrezGeneGeneID:30009
(SSTAR profile)
UniProt IDTBX21_HUMAN
UniProt ACQ9UL17
(TFClass)
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 9.99136
0.0005 11.802760000000001
0.0001 15.209859999999999
GTEx tissue expression atlas TBX21 expression
ReMap ChIP-seq dataset list TBX21 datasets
Motifs in JASPAR
PCM
AAACAGATCACCCGCTGAGCGGGTTATCTGTT
0131.030.075.012.021.020.020.012.039.027.083.022.017.014.061.016.0
0246.017.033.012.034.09.024.024.058.023.087.071.018.05.032.07.0
0326.027.097.06.010.024.09.011.024.038.0100.014.010.015.077.012.0
0429.04.023.014.040.010.016.038.078.024.0111.070.07.06.027.03.0
05102.013.034.05.030.01.07.06.0120.05.046.06.054.06.062.03.0
06116.014.0146.030.011.00.07.07.028.05.0109.07.03.02.015.00.0
071.01.0155.01.00.00.021.00.08.01.0267.01.01.01.042.00.0
081.00.00.09.00.00.00.03.00.03.05.0477.00.00.00.02.0
090.00.01.00.00.00.03.00.00.00.05.00.07.00.0480.04.0
103.00.03.01.00.00.00.00.0128.08.057.0296.00.00.01.03.0
115.022.091.013.00.00.03.05.03.02.043.013.09.036.0212.043.0
1212.00.05.00.049.02.05.04.0244.04.079.022.049.01.020.04.0
13192.044.084.034.02.00.02.03.033.016.030.030.010.01.017.02.0
1480.048.061.048.013.012.015.021.051.026.028.028.016.06.019.028.0
PWM
AAACAGATCACCCGCTGAGCGGGTTATCTGTT
01-0.008-0.040.868-0.938-0.392-0.439-0.439-0.9380.219-0.1440.969-0.346-0.599-0.7880.663-0.658
020.383-0.5990.054-0.9380.083-1.215-0.26-0.260.613-0.3021.0160.814-0.543-1.770.023-1.454
03-0.181-0.1441.124-1.6-1.114-0.26-1.215-1.022-0.260.1931.155-0.788-1.114-0.7210.894-0.938
04-0.074-1.975-0.302-0.7880.244-1.114-0.6580.1930.907-0.261.2590.8-1.454-1.6-0.144-2.234
051.174-0.860.083-1.77-0.04-3.126-1.454-1.61.336-1.770.383-1.60.542-1.60.679-2.234
061.303-0.7881.532-0.04-1.022-4.4-1.454-1.454-0.108-1.771.241-1.454-2.234-2.584-0.721-4.4
07-3.126-3.1261.592-3.126-4.4-4.4-0.392-4.4-1.328-3.1262.134-3.126-3.126-3.1260.293-4.4
08-3.126-4.4-4.4-1.215-4.4-4.4-4.4-2.234-4.4-2.234-1.772.714-4.4-4.4-4.4-2.584
09-4.4-4.4-3.126-4.4-4.4-4.4-2.234-4.4-4.4-4.4-1.77-4.4-1.454-4.42.72-1.975
10-2.234-4.4-2.234-3.126-4.4-4.4-4.4-4.41.401-1.3280.5952.237-4.4-4.4-3.126-2.234
11-1.77-0.3461.061-0.86-4.4-4.4-2.234-1.77-2.234-2.5840.316-0.86-1.2150.141.9040.316
12-0.938-4.4-1.77-4.40.445-2.584-1.77-1.9752.044-1.9750.92-0.3460.445-3.126-0.439-1.975
131.8050.3390.9810.083-2.584-4.4-2.584-2.2340.054-0.658-0.04-0.04-1.114-3.126-0.599-2.584
140.9320.4250.6630.425-0.86-0.938-0.721-0.3920.485-0.181-0.108-0.108-0.658-1.6-0.49-0.108