Model info
| Transcription factor | TBX21 (GeneCards) | ||||||||
| Model | TBX21_HUMAN.H11MO.0.A | ||||||||
| Model type | Mononucleotide PWM | ||||||||
| LOGO |  | ||||||||
| LOGO (reverse complement) |  | ||||||||
| Data source | ChIP-Seq | ||||||||
| Model release | HOCOMOCOv11 | ||||||||
| Model length | 13 | ||||||||
| Quality | A | ||||||||
| Motif rank | 0 | ||||||||
| Consensus | vdvddRSTGWKRn | ||||||||
| Best auROC (human) | 0.829 | ||||||||
| Best auROC (mouse) | 0.831 | ||||||||
| Peak sets in benchmark (human) | 7 | ||||||||
| Peak sets in benchmark (mouse) | 17 | ||||||||
| Aligned words | 497 | ||||||||
| TF family | TBrain-related factors {6.5.2} | ||||||||
| TF subfamily | TBX21 (T-bet) {6.5.2.0.3} | ||||||||
| HGNC | HGNC:11599 | ||||||||
| EntrezGene | GeneID:30009 (SSTAR profile) | ||||||||
| UniProt ID | TBX21_HUMAN | ||||||||
| UniProt AC | Q9UL17 (TFClass) | ||||||||
| Comment | |||||||||
| Downloads | pcm
pwm alignment threshold to P-value grid | ||||||||
| Standard thresholds |
| ||||||||
| GTEx tissue expression atlas | TBX21 expression | ||||||||
| ReMap ChIP-seq dataset list | TBX21 datasets | ||||||||
| Motifs in JASPAR |
PCM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 106.0 | 100.0 | 217.0 | 71.0 |
| 02 | 106.0 | 57.0 | 156.0 | 175.0 |
| 03 | 63.0 | 92.0 | 283.0 | 56.0 |
| 04 | 163.0 | 54.0 | 165.0 | 112.0 |
| 05 | 243.0 | 26.0 | 159.0 | 66.0 |
| 06 | 94.0 | 4.0 | 346.0 | 50.0 |
| 07 | 28.0 | 147.0 | 297.0 | 22.0 |
| 08 | 24.0 | 4.0 | 4.0 | 462.0 |
| 09 | 1.0 | 1.0 | 478.0 | 14.0 |
| 10 | 73.0 | 62.0 | 60.0 | 299.0 |
| 11 | 21.0 | 81.0 | 303.0 | 89.0 |
| 12 | 297.0 | 9.0 | 157.0 | 31.0 |
| 13 | 186.0 | 94.0 | 128.0 | 86.0 |
PWM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | -0.151 | -0.208 | 0.558 | -0.544 |
| 02 | -0.151 | -0.759 | 0.231 | 0.345 |
| 03 | -0.661 | -0.29 | 0.822 | -0.776 |
| 04 | 0.274 | -0.811 | 0.287 | -0.096 |
| 05 | 0.671 | -1.513 | 0.25 | -0.616 |
| 06 | -0.269 | -3.115 | 1.022 | -0.886 |
| 07 | -1.443 | 0.172 | 0.87 | -1.67 |
| 08 | -1.588 | -3.115 | -3.115 | 1.31 |
| 09 | -3.892 | -3.892 | 1.344 | -2.085 |
| 10 | -0.517 | -0.677 | -0.709 | 0.877 |
| 11 | -1.713 | -0.415 | 0.89 | -0.323 |
| 12 | 0.87 | -2.473 | 0.237 | -1.346 |
| 13 | 0.405 | -0.269 | 0.035 | -0.357 |