Model info
| Transcription factor | Tbx21 | ||||||||
| Model | TBX21_MOUSE.H11MO.0.A | ||||||||
| Model type | Mononucleotide PWM | ||||||||
| LOGO |  | ||||||||
| LOGO (reverse complement) |  | ||||||||
| Data source | ChIP-Seq | ||||||||
| Model release | HOCOMOCOv11 | ||||||||
| Model length | 12 | ||||||||
| Quality | A | ||||||||
| Motif rank | 0 | ||||||||
| Consensus | dddKGTGdSWdd | ||||||||
| Best auROC (human) | 0.804 | ||||||||
| Best auROC (mouse) | 0.867 | ||||||||
| Peak sets in benchmark (human) | 7 | ||||||||
| Peak sets in benchmark (mouse) | 17 | ||||||||
| Aligned words | 507 | ||||||||
| TF family | TBrain-related factors {6.5.2} | ||||||||
| TF subfamily | TBX21 (T-bet) {6.5.2.0.3} | ||||||||
| MGI | MGI:1888984 | ||||||||
| EntrezGene | GeneID:57765 (SSTAR profile) | ||||||||
| UniProt ID | TBX21_MOUSE | ||||||||
| UniProt AC | Q9JKD8 (TFClass) | ||||||||
| Comment | |||||||||
| Downloads | pcm
pwm alignment threshold to P-value grid | ||||||||
| Standard thresholds |
| ||||||||
| GTEx tissue expression atlas | Tbx21 expression | ||||||||
| Motifs in JASPAR |
PCM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 131.0 | 38.0 | 251.0 | 80.0 |
| 02 | 109.0 | 90.0 | 209.0 | 92.0 |
| 03 | 269.0 | 29.0 | 112.0 | 90.0 |
| 04 | 103.0 | 7.0 | 282.0 | 108.0 |
| 05 | 8.0 | 122.0 | 369.0 | 1.0 |
| 06 | 9.0 | 3.0 | 0.0 | 488.0 |
| 07 | 0.0 | 2.0 | 471.0 | 27.0 |
| 08 | 137.0 | 24.0 | 71.0 | 268.0 |
| 09 | 15.0 | 115.0 | 323.0 | 47.0 |
| 10 | 303.0 | 10.0 | 90.0 | 97.0 |
| 11 | 168.0 | 69.0 | 193.0 | 70.0 |
| 12 | 168.0 | 61.0 | 111.0 | 160.0 |
PWM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 0.046 | -1.163 | 0.691 | -0.439 |
| 02 | -0.135 | -0.324 | 0.509 | -0.302 |
| 03 | 0.76 | -1.421 | -0.108 | -0.324 |
| 04 | -0.191 | -2.694 | 0.807 | -0.144 |
| 05 | -2.584 | -0.024 | 1.074 | -3.903 |
| 06 | -2.484 | -3.325 | -4.4 | 1.353 |
| 07 | -4.4 | -3.573 | 1.317 | -1.489 |
| 08 | 0.091 | -1.6 | -0.556 | 0.756 |
| 09 | -2.034 | -0.082 | 0.942 | -0.958 |
| 10 | 0.878 | -2.394 | -0.324 | -0.25 |
| 11 | 0.293 | -0.584 | 0.43 | -0.57 |
| 12 | 0.293 | -0.705 | -0.117 | 0.244 |