Model info
| Transcription factor | TCF7 (GeneCards) | ||||||||
| Model | TCF7_HUMAN.H11MO.0.A | ||||||||
| Model type | Mononucleotide PWM | ||||||||
| LOGO |  | ||||||||
| LOGO (reverse complement) |  | ||||||||
| Data source | ChIP-Seq | ||||||||
| Model release | HOCOMOCOv11 | ||||||||
| Model length | 16 | ||||||||
| Quality | A | ||||||||
| Motif rank | 0 | ||||||||
| Consensus | dvhvWSWTSAAARvnv | ||||||||
| Best auROC (human) | 0.847 | ||||||||
| Best auROC (mouse) | 0.929 | ||||||||
| Peak sets in benchmark (human) | 7 | ||||||||
| Peak sets in benchmark (mouse) | 19 | ||||||||
| Aligned words | 500 | ||||||||
| TF family | TCF-7-related factors {4.1.3} | ||||||||
| TF subfamily | TCF-7 (TCF-1) [1] {4.1.3.0.1} | ||||||||
| HGNC | HGNC:11639 | ||||||||
| EntrezGene | GeneID:6932 (SSTAR profile) | ||||||||
| UniProt ID | TCF7_HUMAN | ||||||||
| UniProt AC | P36402 (TFClass) | ||||||||
| Comment | |||||||||
| Downloads | pcm
pwm alignment threshold to P-value grid | ||||||||
| Standard thresholds |
| ||||||||
| GTEx tissue expression atlas | TCF7 expression | ||||||||
| ReMap ChIP-seq dataset list | TCF7 datasets | ||||||||
| Motifs in JASPAR |
PCM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 229.0 | 64.0 | 137.0 | 70.0 |
| 02 | 226.0 | 121.0 | 95.0 | 58.0 |
| 03 | 141.0 | 226.0 | 64.0 | 69.0 |
| 04 | 147.0 | 240.0 | 79.0 | 34.0 |
| 05 | 380.0 | 27.0 | 44.0 | 49.0 |
| 06 | 15.0 | 341.0 | 137.0 | 7.0 |
| 07 | 340.0 | 33.0 | 1.0 | 126.0 |
| 08 | 57.0 | 10.0 | 14.0 | 419.0 |
| 09 | 33.0 | 350.0 | 106.0 | 11.0 |
| 10 | 480.0 | 6.0 | 3.0 | 11.0 |
| 11 | 432.0 | 34.0 | 30.0 | 4.0 |
| 12 | 450.0 | 1.0 | 36.0 | 13.0 |
| 13 | 95.0 | 20.0 | 379.0 | 6.0 |
| 14 | 120.0 | 107.0 | 243.0 | 30.0 |
| 15 | 164.0 | 123.0 | 151.0 | 62.0 |
| 16 | 222.0 | 95.0 | 98.0 | 85.0 |
PWM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 0.6 | -0.658 | 0.091 | -0.57 |
| 02 | 0.587 | -0.032 | -0.271 | -0.754 |
| 03 | 0.119 | 0.587 | -0.658 | -0.584 |
| 04 | 0.16 | 0.646 | -0.452 | -1.27 |
| 05 | 1.104 | -1.489 | -1.022 | -0.918 |
| 06 | -2.034 | 0.996 | 0.091 | -2.694 |
| 07 | 0.993 | -1.298 | -3.903 | 0.008 |
| 08 | -0.771 | -2.394 | -2.096 | 1.201 |
| 09 | -1.298 | 1.022 | -0.163 | -2.311 |
| 10 | 1.336 | -2.819 | -3.325 | -2.311 |
| 11 | 1.231 | -1.27 | -1.389 | -3.126 |
| 12 | 1.272 | -3.903 | -1.215 | -2.163 |
| 13 | -0.271 | -1.77 | 1.101 | -2.819 |
| 14 | -0.04 | -0.153 | 0.659 | -1.389 |
| 15 | 0.269 | -0.016 | 0.187 | -0.689 |
| 16 | 0.569 | -0.271 | -0.24 | -0.38 |