We, Russian scientists of the autosome team, are depressed by the dire events caused by Russian military actions in Ukraine.
We express our condolences to all affected people and sincerely hope for a prompt transition to peace.
Model info
Transcription factorTcf7
ModelTCF7_MOUSE.H11DI.0.A
Model typeDinucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceChIP-Seq
Model releaseHOCOMOCOv11
Model length15
Quality
A
Motif rank
0
ConsensusnvvvASWWSAAARvn
Best auROC (human)0.858
Best auROC (mouse)0.944
Peak sets in benchmark (human)7
Peak sets in benchmark (mouse)19
Aligned words499
TF familyTCF-7-related factors {4.1.3}
TF subfamilyTCF-7 (TCF-1) [1] {4.1.3.0.1}
MGIMGI:98507
EntrezGeneGeneID:21414
(SSTAR profile)
UniProt IDTCF7_MOUSE
UniProt ACQ00417
(TFClass)
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 11.238610000000001
0.0005 12.82526
0.0001 15.97746
GTEx tissue expression atlas Tcf7 expression
Motifs in JASPAR
MA0769.1 (Tcf7; Mus musculus)
PCM
AAACAGATCACCCGCTGAGCGGGTTATCTGTT
0177.036.041.06.054.027.023.010.048.043.028.07.026.025.027.020.0
0251.094.047.013.039.052.021.019.025.048.035.011.010.014.014.05.0
0346.034.038.07.023.0152.028.05.038.042.034.03.012.015.018.03.0
0493.02.011.013.0209.03.014.017.086.02.022.08.011.01.04.02.0
0511.0262.0120.06.00.07.01.00.00.021.029.01.01.028.09.02.0
069.02.00.01.0214.06.05.093.0130.03.03.023.05.00.00.04.0
0782.010.059.0207.01.00.05.05.02.01.02.03.021.00.016.084.0
0810.060.036.00.00.09.02.00.016.030.035.01.036.0194.061.08.0
0959.01.00.02.0278.00.02.013.0127.03.01.03.09.00.00.00.0
10420.013.039.01.01.00.03.00.01.00.02.00.011.00.07.00.0
11388.01.027.017.012.00.01.00.047.01.01.02.00.00.01.00.0
1268.051.0300.028.01.00.01.00.04.03.022.01.03.06.09.01.0
139.022.043.02.032.018.09.01.078.074.0156.024.05.05.014.06.0
1433.020.062.09.052.028.020.019.050.079.061.032.010.012.09.02.0
PWM
AAACAGATCACCCGCTGAGCGGGTTATCTGTT
010.8980.1440.273-1.5960.546-0.14-0.298-1.110.4290.32-0.104-1.451-0.177-0.216-0.14-0.435
020.4891.0970.408-0.8560.2230.508-0.388-0.486-0.2160.4290.116-1.018-1.11-0.784-0.784-1.766
030.3870.0870.197-1.451-0.2981.576-0.104-1.7660.1970.2960.087-2.23-0.934-0.717-0.539-2.23
041.086-2.58-1.018-0.8561.894-2.23-0.784-0.5951.008-2.58-0.342-1.324-1.018-3.122-1.971-2.58
05-1.0182.1191.34-1.596-4.397-1.451-3.122-4.397-4.397-0.388-0.07-3.122-3.122-0.104-1.211-2.58
06-1.211-2.58-4.397-3.1221.917-1.596-1.7661.0861.42-2.23-2.23-0.298-1.766-4.397-4.397-1.971
070.961-1.110.6341.884-3.122-4.397-1.766-1.766-2.58-3.122-2.58-2.23-0.388-4.397-0.6540.985
08-1.110.650.144-4.397-4.397-1.211-2.58-4.397-0.654-0.0360.116-3.1220.1441.8190.667-1.324
090.634-3.122-4.397-2.582.179-4.397-2.58-0.8561.397-2.23-3.122-2.23-1.211-4.397-4.397-4.397
102.591-0.8560.223-3.122-3.122-4.397-2.23-4.397-3.122-4.397-2.58-4.397-1.018-4.397-1.451-4.397
112.512-3.122-0.14-0.595-0.934-4.397-3.122-4.3970.408-3.122-3.122-2.58-4.397-4.397-3.122-4.397
120.7750.4892.255-0.104-3.122-4.397-3.122-4.397-1.971-2.23-0.342-3.122-2.23-1.596-1.211-3.122
13-1.211-0.3420.32-2.580.027-0.539-1.211-3.1220.9110.8591.602-0.256-1.766-1.766-0.784-1.596
140.058-0.4350.683-1.2110.508-0.104-0.435-0.4860.4690.9240.6670.027-1.11-0.934-1.211-2.58