We, Russian scientists of the autosome team, are depressed by the dire events caused by Russian military actions in Ukraine.
We express our condolences to all affected people and sincerely hope for a prompt transition to peace.
Model info
Transcription factorTEAD1
(GeneCards)
ModelTEAD1_HUMAN.H11DI.0.A
Model typeDinucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceChIP-Seq
Model releaseHOCOMOCOv11
Model length18
Quality
A
Motif rank
0
ConsensusbhRCATTCCWRSvdbnnn
Best auROC (human)0.984
Best auROC (mouse)0.938
Peak sets in benchmark (human)14
Peak sets in benchmark (mouse)5
Aligned words511
TF familyTEF-1-related factors {3.6.1}
TF subfamilyTEF-1 (TEAD-1, TCF-13) {3.6.1.0.1}
HGNCHGNC:11714
EntrezGeneGeneID:7003
(SSTAR profile)
UniProt IDTEAD1_HUMAN
UniProt ACP28347
(TFClass)
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 8.43321
0.0005 10.72981
0.0001 15.364060000000002
GTEx tissue expression atlas TEAD1 expression
ReMap ChIP-seq dataset list TEAD1 datasets
Motifs in JASPAR
PCM
AAACAGATCACCCGCTGAGCGGGTTATCTGTT
0119.017.017.021.040.074.02.081.016.027.020.028.013.048.038.039.0
0243.02.042.01.0112.07.027.020.043.04.029.01.044.04.0113.08.0
0321.0217.04.00.00.017.00.00.027.0171.011.02.04.025.01.00.0
0452.00.00.00.0428.00.02.00.016.00.00.00.02.00.00.00.0
050.01.01.0496.00.00.00.00.00.00.00.02.00.00.00.00.0
060.00.00.00.00.00.00.01.00.00.00.01.045.00.011.0442.0
070.041.00.04.00.00.00.00.00.011.00.00.02.0432.02.08.0
080.02.00.00.02.0447.00.035.00.02.00.00.00.06.00.06.0
091.00.00.01.0265.015.011.0166.00.00.00.00.01.03.02.035.0
1042.08.0198.019.011.03.00.04.01.02.08.02.014.015.0133.040.0
115.07.056.00.012.06.05.05.030.094.0202.013.09.07.044.05.0
1217.024.015.00.029.056.011.018.066.0105.0122.014.02.010.09.02.0
1357.018.028.011.0109.019.016.051.060.034.038.025.09.09.012.04.0
1426.028.041.0140.020.017.01.042.019.022.025.028.016.015.042.018.0
1525.020.021.015.034.022.05.021.029.034.030.016.037.026.046.0119.0
1615.027.034.049.030.034.02.036.016.023.027.036.013.085.042.031.0
1713.013.032.016.027.088.05.049.017.027.027.034.022.021.057.052.0
PWM
AAACAGATCACCCGCTGAGCGGGTTATCTGTT
01-0.49-0.599-0.599-0.3920.2440.855-2.5840.945-0.658-0.144-0.439-0.108-0.860.4250.1930.219
020.316-2.5840.293-3.1261.268-1.454-0.144-0.4390.316-1.975-0.074-3.1260.339-1.9751.276-1.328
03-0.3921.927-1.975-4.4-4.4-0.599-4.4-4.4-0.1441.69-1.022-2.584-1.975-0.22-3.126-4.4
040.504-4.4-4.4-4.42.606-4.4-2.584-4.4-0.658-4.4-4.4-4.4-2.584-4.4-4.4-4.4
05-4.4-3.126-3.1262.753-4.4-4.4-4.4-4.4-4.4-4.4-4.4-2.584-4.4-4.4-4.4-4.4
06-4.4-4.4-4.4-4.4-4.4-4.4-4.4-3.126-4.4-4.4-4.4-3.1260.361-4.4-1.0222.638
07-4.40.269-4.4-1.975-4.4-4.4-4.4-4.4-4.4-1.022-4.4-4.4-2.5842.615-2.584-1.328
08-4.4-2.584-4.4-4.4-2.5842.649-4.40.112-4.4-2.584-4.4-4.4-4.4-1.6-4.4-1.6
09-3.126-4.4-4.4-3.1262.127-0.721-1.0221.66-4.4-4.4-4.4-4.4-3.126-2.234-2.5840.112
100.293-1.3281.836-0.49-1.022-2.234-4.4-1.975-3.126-2.584-1.328-2.584-0.788-0.7211.4390.244
11-1.77-1.4540.578-4.4-0.938-1.6-1.77-1.77-0.041.0931.856-0.86-1.215-1.4540.339-1.77
12-0.599-0.26-0.721-4.4-0.0740.578-1.022-0.5430.7411.2031.353-0.788-2.584-1.114-1.215-2.584
130.595-0.543-0.108-1.0221.241-0.49-0.6580.4850.6460.0830.193-0.22-1.215-1.215-0.938-1.975
14-0.181-0.1080.2691.49-0.439-0.599-3.1260.293-0.49-0.346-0.22-0.108-0.658-0.7210.293-0.543
15-0.22-0.439-0.392-0.7210.083-0.346-1.77-0.392-0.0740.083-0.04-0.6580.167-0.1810.3831.328
16-0.721-0.1440.0830.445-0.040.083-2.5840.14-0.658-0.302-0.1440.14-0.860.9930.293-0.008
17-0.86-0.860.023-0.658-0.1441.027-1.770.445-0.599-0.144-0.1440.083-0.346-0.3920.5950.504