Model info
| Transcription factor | Tead1 | ||||||||
| Model | TEAD1_MOUSE.H11MO.0.A | ||||||||
| Model type | Mononucleotide PWM | ||||||||
| LOGO |  | ||||||||
| LOGO (reverse complement) |  | ||||||||
| Data source | ChIP-Seq | ||||||||
| Model release | HOCOMOCOv11 | ||||||||
| Model length | 11 | ||||||||
| Quality | A | ||||||||
| Motif rank | 0 | ||||||||
| Consensus | RMATTCCWRSv | ||||||||
| Best auROC (human) | 0.949 | ||||||||
| Best auROC (mouse) | 0.95 | ||||||||
| Peak sets in benchmark (human) | 14 | ||||||||
| Peak sets in benchmark (mouse) | 5 | ||||||||
| Aligned words | 500 | ||||||||
| TF family | TEF-1-related factors {3.6.1} | ||||||||
| TF subfamily | TEF-1 (TEAD-1, TCF-13) {3.6.1.0.1} | ||||||||
| MGI | MGI:101876 | ||||||||
| EntrezGene | GeneID:21676 (SSTAR profile) | ||||||||
| UniProt ID | TEAD1_MOUSE | ||||||||
| UniProt AC | P30051 (TFClass) | ||||||||
| Comment | |||||||||
| Downloads | pcm
pwm alignment threshold to P-value grid | ||||||||
| Standard thresholds |
| ||||||||
| GTEx tissue expression atlas | Tead1 expression | ||||||||
| Motifs in JASPAR |
PCM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 303.0 | 0.0 | 179.0 | 18.0 |
| 02 | 108.0 | 369.0 | 15.0 | 8.0 |
| 03 | 494.0 | 3.0 | 3.0 | 0.0 |
| 04 | 0.0 | 2.0 | 1.0 | 497.0 |
| 05 | 41.0 | 1.0 | 11.0 | 447.0 |
| 06 | 0.0 | 493.0 | 7.0 | 0.0 |
| 07 | 3.0 | 474.0 | 1.0 | 22.0 |
| 08 | 287.0 | 24.0 | 32.0 | 157.0 |
| 09 | 77.0 | 53.0 | 318.0 | 52.0 |
| 10 | 21.0 | 154.0 | 305.0 | 20.0 |
| 11 | 113.0 | 168.0 | 170.0 | 49.0 |
PWM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 0.878 | -4.4 | 0.355 | -1.868 |
| 02 | -0.144 | 1.074 | -2.034 | -2.584 |
| 03 | 1.365 | -3.325 | -3.325 | -4.4 |
| 04 | -4.4 | -3.573 | -3.903 | 1.371 |
| 05 | -1.09 | -3.903 | -2.311 | 1.265 |
| 06 | -4.4 | 1.363 | -2.694 | -4.4 |
| 07 | -3.325 | 1.324 | -3.903 | -1.681 |
| 08 | 0.824 | -1.6 | -1.328 | 0.225 |
| 09 | -0.477 | -0.841 | 0.926 | -0.86 |
| 10 | -1.725 | 0.206 | 0.885 | -1.77 |
| 11 | -0.1 | 0.293 | 0.304 | -0.918 |