We, Russian scientists of the autosome team, are depressed by the dire events caused by Russian military actions in Ukraine.
We express our condolences to all affected people and sincerely hope for a prompt transition to peace.
Model info
Transcription factorTead2
ModelTEAD2_MOUSE.H11DI.0.C
Model typeDinucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceChIP-Seq
Model releaseHOCOMOCOv11
Model length15
Quality
C
Motif rank
0
ConsensusnbRMATTCCWRSnhb
Best auROC (human)0.551
Best auROC (mouse)0.946
Peak sets in benchmark (human)2
Peak sets in benchmark (mouse)2
Aligned words309
TF familyTEF-1-related factors {3.6.1}
TF subfamilyTEF-4 (TEAD-2) {3.6.1.0.3}
MGIMGI:104904
EntrezGeneGeneID:21677
(SSTAR profile)
UniProt IDTEAD2_MOUSE
UniProt ACP48301
(TFClass)
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 8.63761
0.0005 10.82536
0.0001 15.472560000000001
GTEx tissue expression atlas Tead2 expression
Motifs in JASPAR
MA1121.1 (TEAD2; Homo sapiens)
PCM
AAACAGATCACCCGCTGAGCGGGTTATCTGTT
019.025.018.015.029.055.03.032.05.015.014.015.09.032.021.011.0
0234.01.017.00.0116.01.08.02.036.01.019.00.014.00.059.00.0
0330.0147.04.019.00.01.01.01.028.073.01.01.00.02.00.00.0
0455.01.02.00.0219.02.01.01.05.01.00.00.021.00.00.00.0
052.08.02.0288.00.01.00.03.01.00.00.02.00.00.00.01.0
060.00.01.02.00.00.00.09.01.00.00.01.023.00.01.0270.0
070.023.01.00.00.00.00.00.00.02.00.00.00.0279.02.01.0
080.00.00.00.00.0287.01.016.00.03.00.00.00.01.00.00.0
090.00.00.00.0166.017.06.0102.01.00.00.00.00.00.00.016.0
1028.03.0130.06.011.02.01.03.03.01.01.01.09.07.089.013.0
114.012.030.05.02.06.03.02.029.040.0130.022.00.04.019.00.0
128.07.018.02.026.016.03.017.036.060.056.030.04.07.011.07.0
1329.021.017.07.050.09.07.024.035.024.013.016.04.031.012.09.0
1417.010.029.062.019.036.05.025.012.012.012.013.04.010.018.024.0
PWM
AAACAGATCACCCGCTGAGCGGGTTATCTGTT
01-0.740.257-0.066-0.2440.4041.038-1.7650.501-1.297-0.244-0.312-0.244-0.740.5010.085-0.546
020.561-2.67-0.122-4.0031.781-2.67-0.853-2.1180.617-2.67-0.013-4.003-0.312-4.0031.108-4.003
030.4372.017-1.504-0.013-4.003-2.67-2.67-2.670.3691.319-2.67-2.67-4.003-2.118-4.003-4.003
041.038-2.67-2.118-4.0032.415-2.118-2.67-2.67-1.297-2.67-4.003-4.0030.085-4.003-4.003-4.003
05-2.118-0.853-2.1182.688-4.003-2.67-4.003-1.765-2.67-4.003-4.003-2.118-4.003-4.003-4.003-2.67
06-4.003-4.003-2.67-2.118-4.003-4.003-4.003-0.74-2.67-4.003-4.003-2.670.175-4.003-2.672.624
07-4.0030.175-2.67-4.003-4.003-4.003-4.003-4.003-4.003-2.118-4.003-4.003-4.0032.657-2.118-2.67
08-4.003-4.003-4.003-4.003-4.0032.685-2.67-0.181-4.003-1.765-4.003-4.003-4.003-2.67-4.003-4.003
09-4.003-4.003-4.003-4.0032.138-0.122-1.1261.653-2.67-4.003-4.003-4.003-4.003-4.003-4.003-0.181
100.369-1.7651.894-1.126-0.546-2.118-2.67-1.765-1.765-2.67-2.67-2.67-0.74-0.981.517-0.384
11-1.504-0.4620.437-1.297-2.118-1.126-1.765-2.1180.4040.7221.8940.131-4.003-1.504-0.013-4.003
12-0.853-0.98-0.066-2.1180.296-0.181-1.765-0.1220.6171.1241.0560.437-1.504-0.98-0.546-0.98
130.4040.085-0.122-0.980.943-0.74-0.980.2170.590.217-0.384-0.181-1.5040.47-0.462-0.74
14-0.122-0.6380.4041.157-0.0130.617-1.2970.257-0.462-0.462-0.462-0.384-1.504-0.638-0.0660.217