Model info
| Transcription factor | Tead2 | ||||||||
| Model | TEAD2_MOUSE.H11MO.0.C | ||||||||
| Model type | Mononucleotide PWM | ||||||||
| LOGO |  | ||||||||
| LOGO (reverse complement) |  | ||||||||
| Data source | ChIP-Seq | ||||||||
| Model release | HOCOMOCOv11 | ||||||||
| Model length | 12 | ||||||||
| Quality | C | ||||||||
| Motif rank | 0 | ||||||||
| Consensus | hbRMATTCCWRv | ||||||||
| Best auROC (human) | 0.519 | ||||||||
| Best auROC (mouse) | 0.936 | ||||||||
| Peak sets in benchmark (human) | 2 | ||||||||
| Peak sets in benchmark (mouse) | 2 | ||||||||
| Aligned words | 308 | ||||||||
| TF family | TEF-1-related factors {3.6.1} | ||||||||
| TF subfamily | TEF-4 (TEAD-2) {3.6.1.0.3} | ||||||||
| MGI | MGI:104904 | ||||||||
| EntrezGene | GeneID:21677 (SSTAR profile) | ||||||||
| UniProt ID | TEAD2_MOUSE | ||||||||
| UniProt AC | P48301 (TFClass) | ||||||||
| Comment | |||||||||
| Downloads | pcm
pwm alignment threshold to P-value grid | ||||||||
| Standard thresholds |
| ||||||||
| GTEx tissue expression atlas | Tead2 expression | ||||||||
| Motifs in JASPAR |
PCM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 64.0 | 123.0 | 47.0 | 74.0 |
| 02 | 44.0 | 131.0 | 60.0 | 73.0 |
| 03 | 203.0 | 1.0 | 99.0 | 5.0 |
| 04 | 53.0 | 230.0 | 5.0 | 20.0 |
| 05 | 299.0 | 2.0 | 1.0 | 6.0 |
| 06 | 2.0 | 6.0 | 6.0 | 294.0 |
| 07 | 23.0 | 1.0 | 4.0 | 280.0 |
| 08 | 0.0 | 300.0 | 4.0 | 4.0 |
| 09 | 0.0 | 290.0 | 2.0 | 16.0 |
| 10 | 162.0 | 16.0 | 6.0 | 124.0 |
| 11 | 45.0 | 14.0 | 227.0 | 22.0 |
| 12 | 35.0 | 64.0 | 178.0 | 31.0 |
PWM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | -0.181 | 0.462 | -0.482 | -0.039 |
| 02 | -0.546 | 0.524 | -0.244 | -0.052 |
| 03 | 0.958 | -3.473 | 0.247 | -2.501 |
| 04 | -0.365 | 1.082 | -2.501 | -1.297 |
| 05 | 1.343 | -3.129 | -3.473 | -2.356 |
| 06 | -3.129 | -2.356 | -2.356 | 1.326 |
| 07 | -1.166 | -3.473 | -2.67 | 1.278 |
| 08 | -4.003 | 1.346 | -2.67 | -2.67 |
| 09 | -4.003 | 1.313 | -3.129 | -1.504 |
| 10 | 0.734 | -1.504 | -2.356 | 0.47 |
| 11 | -0.524 | -1.626 | 1.069 | -1.208 |
| 12 | -0.767 | -0.181 | 0.828 | -0.883 |