We, Russian scientists of the autosome team, are depressed by the dire events caused by Russian military actions in Ukraine.
We express our condolences to all affected people and sincerely hope for a prompt transition to peace.
Model info
Transcription factorTEAD4
(GeneCards)
ModelTEAD4_HUMAN.H11DI.0.A
Model typeDinucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceChIP-Seq
Model releaseHOCOMOCOv11
Model length18
Quality
A
Motif rank
0
ConsensushnRMATTCCWRSvddnbb
Best auROC (human)0.983
Best auROC (mouse)0.947
Peak sets in benchmark (human)57
Peak sets in benchmark (mouse)10
Aligned words505
TF familyTEF-1-related factors {3.6.1}
TF subfamilyTEF-3 (TEAD-4, TCF-13L1) {3.6.1.0.2}
HGNCHGNC:11717
EntrezGeneGeneID:7004
(SSTAR profile)
UniProt IDTEAD4_HUMAN
UniProt ACQ15561
(TFClass)
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 8.313860000000002
0.0005 10.68581
0.0001 15.411010000000001
GTEx tissue expression atlas TEAD4 expression
ReMap ChIP-seq dataset list TEAD4 datasets
Motifs in JASPAR
PCM
AAACAGATCACCCGCTGAGCGGGTTATCTGTT
0111.026.038.017.034.075.04.093.010.030.019.023.018.027.047.028.0
0233.01.038.01.0131.01.020.06.056.02.049.01.030.04.0120.07.0
0358.0174.018.00.00.07.00.01.050.0159.017.01.02.012.01.00.0
04108.00.02.00.0350.01.01.00.036.00.00.00.02.00.00.00.0
050.00.00.0496.00.00.00.01.00.00.00.03.00.00.00.00.0
060.00.00.00.00.00.00.00.00.00.00.00.031.01.06.0462.0
070.024.05.02.00.00.00.01.00.06.00.00.00.0451.08.03.0
080.00.00.00.00.0433.00.048.00.08.00.05.00.02.00.04.0
090.00.00.00.0253.029.07.0154.00.00.00.00.05.04.03.045.0
1032.05.0195.026.018.04.02.09.00.01.07.02.013.016.0148.022.0
118.06.049.00.07.08.09.02.047.0117.0176.012.04.012.041.02.0
1219.030.017.00.040.080.02.021.056.0115.097.07.02.06.05.03.0
1361.013.034.09.0139.020.018.054.063.022.023.013.011.03.011.06.0
1414.031.056.0173.023.07.07.021.026.018.023.019.04.010.043.025.0
1518.017.023.09.031.016.03.016.028.020.059.022.044.012.051.0131.0
1615.043.032.031.020.025.02.018.019.036.044.037.015.0102.030.031.0
1718.013.028.010.029.0111.08.058.021.028.027.032.08.035.029.045.0
PWM
AAACAGATCACCCGCTGAGCGGGTTATCTGTT
01-1.022-0.1810.193-0.5990.0830.868-1.9751.082-1.114-0.04-0.49-0.302-0.543-0.1440.404-0.108
020.054-3.1260.193-3.1261.424-3.126-0.439-1.60.578-2.5840.445-3.126-0.04-1.9751.336-1.454
030.6131.707-0.543-4.4-4.4-1.454-4.4-3.1260.4651.617-0.599-3.126-2.584-0.938-3.126-4.4
041.231-4.4-2.584-4.42.405-3.126-3.126-4.40.14-4.4-4.4-4.4-2.584-4.4-4.4-4.4
05-4.4-4.4-4.42.753-4.4-4.4-4.4-3.126-4.4-4.4-4.4-2.234-4.4-4.4-4.4-4.4
06-4.4-4.4-4.4-4.4-4.4-4.4-4.4-4.4-4.4-4.4-4.4-4.4-0.008-3.126-1.62.682
07-4.4-0.26-1.77-2.584-4.4-4.4-4.4-3.126-4.4-1.6-4.4-4.4-4.42.658-1.328-2.234
08-4.4-4.4-4.4-4.4-4.42.617-4.40.425-4.4-1.328-4.4-1.77-4.4-2.584-4.4-1.975
09-4.4-4.4-4.4-4.42.081-0.074-1.4541.585-4.4-4.4-4.4-4.4-1.77-1.975-2.2340.361
100.023-1.771.821-0.181-0.543-1.975-2.584-1.215-4.4-3.126-1.454-2.584-0.86-0.6581.545-0.346
11-1.328-1.60.445-4.4-1.454-1.328-1.215-2.5840.4041.3111.718-0.938-1.975-0.9380.269-2.584
12-0.49-0.04-0.599-4.40.2440.932-2.584-0.3920.5781.2941.124-1.454-2.584-1.6-1.77-2.234
130.663-0.860.083-1.2151.483-0.439-0.5430.5420.695-0.346-0.302-0.86-1.022-2.234-1.022-1.6
14-0.788-0.0080.5781.701-0.302-1.454-1.454-0.392-0.181-0.543-0.302-0.49-1.975-1.1140.316-0.22
15-0.543-0.599-0.302-1.215-0.008-0.658-2.234-0.658-0.108-0.4390.63-0.3460.339-0.9380.4851.424
16-0.7210.3160.023-0.008-0.439-0.22-2.584-0.543-0.490.140.3390.167-0.7211.174-0.04-0.008
17-0.543-0.86-0.108-1.114-0.0741.259-1.3280.613-0.392-0.108-0.1440.023-1.3280.112-0.0740.361