We, Russian scientists of the autosome team, are depressed by the dire events caused by Russian military actions in Ukraine.
We express our condolences to all affected people and sincerely hope for a prompt transition to peace.
Model info
Transcription factorTead4
ModelTEAD4_MOUSE.H11DI.0.A
Model typeDinucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceChIP-Seq
Model releaseHOCOMOCOv11
Model length18
Quality
A
Motif rank
0
ConsensusnRMATTCCWvdvMKdbbh
Best auROC (human)0.964
Best auROC (mouse)0.955
Peak sets in benchmark (human)57
Peak sets in benchmark (mouse)10
Aligned words491
TF familyTEF-1-related factors {3.6.1}
TF subfamilyTEF-3 (TEAD-4, TCF-13L1, Tefr1) {3.6.1.0.2}
MGIMGI:106907
EntrezGeneGeneID:21679
(SSTAR profile)
UniProt IDTEAD4_MOUSE
UniProt ACQ62296
(TFClass)
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 9.82566
0.0005 11.79941
0.0001 15.79981
GTEx tissue expression atlas Tead4 expression
Motifs in JASPAR
MA0809.1 (TEAD4; Homo sapiens)
PCM
AAACAGATCACCCGCTGAGCGGGTTATCTGTT
0162.02.048.01.0124.02.017.09.067.02.039.04.035.03.065.06.0
0270.0186.031.01.02.07.00.00.037.0113.019.00.01.018.01.00.0
03108.01.01.00.0323.01.00.00.048.01.01.01.01.00.00.00.0
040.01.07.0472.00.00.01.02.00.00.00.02.00.00.00.01.0
050.00.00.00.00.00.00.01.00.00.02.06.060.03.036.0378.0
064.035.012.09.00.02.00.01.00.031.02.05.00.0345.010.030.0
071.01.00.02.07.0310.00.096.02.013.00.09.00.025.00.020.0
080.04.00.06.0127.023.09.0190.00.00.00.00.00.019.03.0105.0
0926.017.068.016.014.015.03.014.03.01.08.00.048.062.0142.049.0
1029.03.052.07.052.04.017.022.064.023.0116.018.020.06.041.012.0
1150.071.042.02.011.021.01.03.066.093.065.02.011.033.013.02.0
1297.07.020.014.0167.023.010.018.072.023.014.012.03.03.01.02.0
1312.05.025.0297.08.016.03.029.06.08.011.020.03.06.014.023.0
145.02.012.010.011.05.06.013.016.05.011.021.061.019.068.0221.0
1519.032.023.019.03.014.05.09.08.051.015.023.07.0177.028.053.0
163.013.08.013.022.0146.012.094.07.023.014.027.09.033.025.037.0
177.011.014.09.067.034.05.0109.07.012.020.020.014.039.037.081.0
PWM
AAACAGATCACCCGCTGAGCGGGTTATCTGTT
010.707-2.5560.453-3.0991.397-2.556-0.571-1.1870.784-2.5560.247-1.9480.14-2.2060.754-1.572
020.8281.8020.02-3.099-2.556-1.427-4.377-4.3770.1951.305-0.462-4.377-3.099-0.515-3.099-4.377
031.259-3.099-3.099-4.3772.353-3.099-4.377-4.3770.453-3.099-3.099-3.099-3.099-4.377-4.377-4.377
04-4.377-3.099-1.4272.732-4.377-4.377-3.099-2.556-4.377-4.377-4.377-2.556-4.377-4.377-4.377-3.099
05-4.377-4.377-4.377-4.377-4.377-4.377-4.377-3.099-4.377-4.377-2.556-1.5720.674-2.2060.1682.51
06-1.9480.14-0.91-1.187-4.377-2.556-4.377-3.099-4.3770.02-2.556-1.742-4.3772.418-1.086-0.012
07-3.099-3.099-4.377-2.556-1.4272.312-4.3771.142-2.556-0.832-4.377-1.187-4.377-0.192-4.377-0.411
08-4.377-1.948-4.377-1.5721.421-0.274-1.1871.823-4.377-4.377-4.377-4.377-4.377-0.462-2.2061.231
09-0.153-0.5710.799-0.63-0.76-0.693-2.206-0.76-2.206-3.099-1.3-4.3770.4530.7071.5320.473
10-0.046-2.2060.532-1.4270.532-1.948-0.571-0.3180.739-0.2741.331-0.515-0.411-1.5720.297-0.91
110.4930.8420.321-2.556-0.994-0.364-3.099-2.2060.7691.110.754-2.556-0.9940.082-0.832-2.556
121.152-1.427-0.411-0.761.694-0.274-1.086-0.5150.856-0.274-0.76-0.91-2.206-2.206-3.099-2.556
13-0.91-1.742-0.1922.269-1.3-0.63-2.206-0.046-1.572-1.3-0.994-0.411-2.206-1.572-0.76-0.274
14-1.742-2.556-0.91-1.086-0.994-1.742-1.572-0.832-0.63-1.742-0.994-0.3640.691-0.4620.7991.974
15-0.4620.051-0.274-0.462-2.206-0.76-1.742-1.187-1.30.513-0.693-0.274-1.4271.752-0.080.551
16-2.206-0.832-1.3-0.832-0.3181.56-0.911.121-1.427-0.274-0.76-0.116-1.1870.082-0.1920.195
17-1.427-0.994-0.76-1.1870.7840.111-1.7421.269-1.427-0.91-0.411-0.411-0.760.2470.1950.973