Transcription factor | Tead4 | ||||||||
Model | TEAD4_MOUSE.H11MO.0.A | ||||||||
Model type | Mononucleotide PWM | ||||||||
LOGO | |||||||||
LOGO (reverse complement) | |||||||||
Data source | ChIP-Seq | ||||||||
Model release | HOCOMOCOv11 | ||||||||
Model length | 15 | ||||||||
Quality | A | ||||||||
Motif rank | 0 | ||||||||
Consensus | RMATTCCWvdvdYdb | ||||||||
Best auROC (human) | 0.963 | ||||||||
Best auROC (mouse) | 0.946 | ||||||||
Peak sets in benchmark (human) | 57 | ||||||||
Peak sets in benchmark (mouse) | 10 | ||||||||
Aligned words | 500 | ||||||||
TF family | TEF-1-related factors {3.6.1} | ||||||||
TF subfamily | TEF-3 (TEAD-4, TCF-13L1, Tefr1) {3.6.1.0.2} | ||||||||
MGI | MGI:106907 | ||||||||
EntrezGene | GeneID:21679 (SSTAR profile) | ||||||||
UniProt ID | TEAD4_MOUSE | ||||||||
UniProt AC | Q62296 (TFClass) | ||||||||
Comment | |||||||||
Downloads | pcm
pwm alignment threshold to P-value grid | ||||||||
Standard thresholds |
| ||||||||
GTEx tissue expression atlas | Tead4 expression | ||||||||
Motifs in JASPAR |
A | C | G | T | |
---|---|---|---|---|
01 | 261.0 | 7.0 | 211.0 | 21.0 |
02 | 125.0 | 347.0 | 26.0 | 2.0 |
03 | 485.0 | 6.0 | 5.0 | 4.0 |
04 | 0.0 | 4.0 | 2.0 | 494.0 |
05 | 21.0 | 4.0 | 26.0 | 449.0 |
06 | 0.0 | 468.0 | 9.0 | 23.0 |
07 | 1.0 | 390.0 | 0.0 | 109.0 |
08 | 163.0 | 18.0 | 10.0 | 309.0 |
09 | 78.0 | 77.0 | 275.0 | 70.0 |
10 | 147.0 | 53.0 | 230.0 | 70.0 |
11 | 92.0 | 236.0 | 153.0 | 19.0 |
12 | 295.0 | 53.0 | 72.0 | 80.0 |
13 | 31.0 | 77.0 | 71.0 | 321.0 |
14 | 132.0 | 66.0 | 110.0 | 192.0 |
15 | 57.0 | 200.0 | 87.0 | 156.0 |
A | C | G | T | |
---|---|---|---|---|
01 | 0.73 | -2.694 | 0.519 | -1.725 |
02 | 0.0 | 1.013 | -1.525 | -3.573 |
03 | 1.347 | -2.819 | -2.961 | -3.126 |
04 | -4.4 | -3.126 | -3.573 | 1.365 |
05 | -1.725 | -3.126 | -1.525 | 1.27 |
06 | -4.4 | 1.311 | -2.484 | -1.64 |
07 | -3.903 | 1.129 | -4.4 | -0.135 |
08 | 0.263 | -1.868 | -2.394 | 0.898 |
09 | -0.464 | -0.477 | 0.782 | -0.57 |
10 | 0.16 | -0.841 | 0.604 | -0.57 |
11 | -0.302 | 0.63 | 0.2 | -1.818 |
12 | 0.852 | -0.841 | -0.543 | -0.439 |
13 | -1.358 | -0.477 | -0.556 | 0.936 |
14 | 0.054 | -0.628 | -0.126 | 0.425 |
15 | -0.771 | 0.465 | -0.357 | 0.219 |