We, Russian scientists of the autosome team, are depressed by the dire events caused by Russian military actions in Ukraine.
We express our condolences to all affected people and sincerely hope for a prompt transition to peace.
Model info
Transcription factorTfcp2l1
ModelTF2L1_MOUSE.H11DI.0.C
Model typeDinucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceChIP-Seq
Model releaseHOCOMOCOv11
Model length23
Quality
C
Motif rank
0
ConsensusdCYRGhYbdddCYRGhYbnvnbh
Best auROC (human)
Best auROC (mouse)0.995
Peak sets in benchmark (human)
Peak sets in benchmark (mouse)3
Aligned words454
TF familyCP2-related factors {6.7.2}
TF subfamilyCP2-L1 (LBP-9, CRTR-1) {6.7.2.0.2}
MGIMGI:2444691
EntrezGeneGeneID:81879
(SSTAR profile)
UniProt IDTF2L1_MOUSE
UniProt ACQ3UNW5
(TFClass)
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 7.35806
0.0005 9.495360000000002
0.0001 13.90776
GTEx tissue expression atlas Tfcp2l1 expression
Motifs in JASPAR
PCM
AAACAGATCACCCGCTGAGCGGGTTATCTGTT
010.0162.03.00.00.044.01.02.00.0129.04.02.00.091.07.02.0
020.00.00.00.031.0240.00.0155.00.010.02.03.00.02.01.03.0
038.00.023.00.0134.02.079.037.00.01.02.00.015.01.0133.012.0
041.01.0154.01.01.00.03.00.03.016.0217.01.00.00.048.01.0
051.02.02.00.01.011.00.05.078.0123.018.0203.00.02.01.00.0
0614.013.014.039.09.032.02.095.01.07.02.011.014.052.014.0128.0
076.018.09.05.022.048.02.032.05.017.09.01.027.0122.048.076.0
0826.04.024.06.0106.036.011.052.030.08.022.08.027.022.042.023.0
0978.010.086.015.046.08.08.08.058.08.027.06.024.05.043.017.0
1092.01.067.046.015.02.00.014.093.09.042.020.08.04.07.027.0
110.0202.06.00.00.016.00.00.01.0103.011.01.00.0101.04.02.0
120.01.00.00.035.0259.01.0127.00.016.01.04.00.01.00.02.0
135.00.030.00.0116.05.0111.045.01.00.00.01.017.01.0111.04.0
140.00.0139.00.01.00.05.00.02.015.0235.00.00.01.049.00.0
151.01.00.01.01.08.00.07.090.0110.022.0206.00.00.00.00.0
1630.022.010.030.06.028.06.079.08.05.03.06.014.036.016.0148.0
179.026.08.015.012.038.08.033.01.022.06.06.020.0116.030.097.0
1811.011.013.07.064.049.012.077.07.010.024.011.028.036.054.033.0
1925.019.058.08.056.016.014.020.041.015.029.018.023.021.070.014.0
2040.015.062.028.021.018.06.026.046.036.060.029.012.011.023.014.0
2112.071.031.05.08.047.01.024.019.083.041.08.04.051.031.011.0
2211.017.013.02.046.0101.09.096.016.049.021.018.05.019.018.06.0
PWM
AAACAGATCACCCGCTGAGCGGGTTATCTGTT
01-4.3071.746-2.125-4.307-4.3070.449-3.02-2.476-4.3071.519-1.866-2.476-4.3071.172-1.345-2.476
02-4.307-4.307-4.307-4.3070.1032.139-4.3071.702-4.307-1.004-2.476-2.125-4.307-2.476-3.02-2.125
03-1.218-4.307-0.192-4.3071.557-2.4761.0310.278-4.307-3.02-2.476-4.307-0.61-3.021.55-0.827
04-3.02-3.021.696-3.02-3.02-4.307-2.125-4.307-2.125-0.5472.038-3.02-4.307-4.3070.536-3.02
05-3.02-2.476-2.476-4.307-3.02-0.912-4.307-1.6611.0181.472-0.4321.972-4.307-2.476-3.02-4.307
06-0.678-0.75-0.6780.33-1.1050.134-2.4761.214-3.02-1.345-2.476-0.912-0.6780.615-0.6781.511
07-1.49-0.432-1.105-1.661-0.2350.536-2.4760.134-1.661-0.488-1.105-3.02-0.0341.4640.5360.992
08-0.071-1.866-0.15-1.491.3240.251-0.9120.6150.07-1.218-0.235-1.218-0.034-0.2350.403-0.192
091.018-1.0041.115-0.610.493-1.218-1.218-1.2180.723-1.218-0.034-1.49-0.15-1.6610.427-0.488
101.182-3.020.8670.493-0.61-2.476-4.307-0.6781.193-1.1050.403-0.329-1.218-1.866-1.345-0.034
11-4.3071.967-1.49-4.307-4.307-0.547-4.307-4.307-3.021.295-0.912-3.02-4.3071.275-1.866-2.476
12-4.307-3.02-4.307-4.3070.2232.215-3.021.504-4.307-0.547-3.02-1.866-4.307-3.02-4.307-2.476
13-1.661-4.3070.07-4.3071.413-1.6611.3690.472-3.02-4.307-4.307-3.02-0.488-3.021.369-1.866
14-4.307-4.3071.594-4.307-3.02-4.307-1.661-4.307-2.476-0.612.118-4.307-4.307-3.020.556-4.307
15-3.02-3.02-4.307-3.02-3.02-1.218-4.307-1.3451.1611.36-0.2351.986-4.307-4.307-4.307-4.307
160.07-0.235-1.0040.07-1.490.002-1.491.031-1.218-1.661-2.125-1.49-0.6780.251-0.5471.656
17-1.105-0.071-1.218-0.61-0.8270.304-1.2180.164-3.02-0.235-1.49-1.49-0.3291.4130.071.235
18-0.912-0.912-0.75-1.3450.8210.556-0.8271.005-1.345-1.004-0.15-0.9120.0020.2510.6520.164
19-0.11-0.3790.723-1.2180.689-0.547-0.678-0.3290.379-0.610.037-0.432-0.192-0.2810.91-0.678
200.355-0.610.790.002-0.281-0.432-1.49-0.0710.4930.2510.7570.037-0.827-0.912-0.192-0.678
21-0.8270.9250.103-1.661-1.2180.515-3.02-0.15-0.3791.080.379-1.218-1.8660.5960.103-0.912
22-0.912-0.488-0.75-2.4760.4931.275-1.1051.225-0.5470.556-0.281-0.432-1.661-0.379-0.432-1.49